RNA–Protein interactions for RNA: ENSMUST00000097822.9

Ubr4-201, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ubr4, Length 15,928 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-201ENSMUST00000097822 Atp6v1dP57746 247 aa7.4□□□□□ -1.22
Ubr4-201ENSMUST00000097822 PogkQ80TC5 607 aa7.4□□□□□ -1.22
Ubr4-201ENSMUST00000097822 CrebrfQ8CDG5 640 aaKnown RBP7.4□□□□□ -1.22
Ubr4-201ENSMUST00000097822 Kif16bB1AVY7 1312 aa7.4□□□□□ -1.23
Ubr4-201ENSMUST00000097822 1700019A02RikA0A087WPV9 146 aa7.4□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Gse1Q3U3C9 1213 aa7.4□□□□□ -1.23
Ubr4-201ENSMUST00000097822 EzrP26040 586 aaKnown RBP7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Tmco5bQ80X59 307 aa7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Smarce1O54941 411 aaKnown RBP7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Mphosph9A6H5Y1 991 aa7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Pes1Q9EQ61 584 aaKnown RBP7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 St18Q80TY4 1045 aa7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Tmf1B9EKI3 1091 aa7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 NcapgE9PWG6 1004 aa7.39□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Ksr2Q3UVC0 959 aa7.38□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Mcm4P49717 862 aa7.38□□□□□ -1.23
Ubr4-201ENSMUST00000097822 PnisrA2AJT4 805 aaKnown RBP7.38□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Ccdc146E9Q9F7 977 aa7.38□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Tex2Q6ZPJ0 1128 aaKnown RBP7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 U2surpQ6NV83 1029 aaKnown RBP7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Irx6Q9ER75 438 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Dusp9Q7TNL7 452 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Cnga1P29974 684 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Cdkn1cP49919 348 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Fyco1Q8VDC1 1437 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Rrp7aQ9D1C9 280 aaKnown RBP7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Kcnj4P52189 445 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Gm20521D3Z5F7 333 aa7.37□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Iffo2Q8R2V2 512 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Ccdc34Q3UI66 367 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Zfp91Q62511 572 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Trim55G3X8Y1 545 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Esx1O88933 382 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Polr3gQ6NXY9 223 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Rpap1Q80TE0 1409 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Drc7Q6V3W6 876 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 R3hcc1Q8BSI6 488 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Sptbn5F6UCX4 1208 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Filip1lQ6P6L0 1131 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Arid4aF8VPQ2 1261 aaKnown RBP7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 BbxQ8VBW5 907 aa7.36□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Ccar1Q8CH18 1146 aaKnown RBP7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Zrsr2Q62377 462 aaKnown RBP7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Anapc15-psA0A140T8L6 141 aa7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Tpm3P21107 285 aaKnown RBP7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Rpgrip1lQ8CG73 1264 aa7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Zfp444Q3TDV8 331 aaKnown RBP7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Pank1Q8K4K6 548 aa7.35□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Cers3Q1A3B0 383 aa7.34□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Sh3bgrQ9WUZ7 214 aa7.34□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Srpk2O54781 681 aaKnown RBP7.34□□□□□ -1.23
Ubr4-201ENSMUST00000097822 U2af1Q9D883 239 aaKnown RBP7.34□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Chrna2Q91X60 512 aa7.34□□□□□ -1.23
Ubr4-201ENSMUST00000097822 Znf526Q8BI66 675 aa7.34□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Def6Q8C2K1 630 aa7.34□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ppp2r3aB2RXC8 1150 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Trim58Q5NCC9 485 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Exosc9Q9JHI7 438 aaKnown RBP7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Hmgn5Q9JL35 406 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Mns1Q61884 491 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Olfml1Q8BSH2 233 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Sh3bp5Q9Z131 463 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 CastP51125 788 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ecm2Q5FW85 670 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Dcaf11Q91VU6 549 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Atl3Q91YH5 541 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Egfem1Q8C088 590 aa7.33□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Frmd3Q8BHD4 595 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Tpm3-rs7D3Z2H9 248 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Rock1P70335 1354 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Mtus2Q3UHD3 1353 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 L3mbtl2P59178 703 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ccdc18Q640L5 1455 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Rassf8Q8CJ96 419 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Pdcl2Q78Y63 240 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Cgnl1Q6AW69 1298 aa7.32□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Anapc15P60007 132 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Nap1l3Q794H2 544 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Pank3Q8R2W9 370 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ftsj3Q9DBE9 838 aaKnown RBP7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Arhgap35Q91YM2 1499 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Nol12Q8BG17 217 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Chmp4cQ9D7F7 232 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Paf1Q8K2T8 535 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Trak1Q6PD31 939 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Stk11ipQ3TAA7 1072 aa7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Eif4g2Q62448 906 aaKnown RBP7.31□□□□□ -1.24
Ubr4-201ENSMUST00000097822 IqubQ8CDK3 788 aa7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ccer1Q9CQL2 403 aa7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Znhit6Q3UFB2 460 aaKnown RBP7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ccdc94Q9D6J3 314 aa7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Phactr2B1AVP0 632 aa7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 NgefQ8CHT1 710 aa7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Baz1aO88379 1555 aa7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Scaf1Q5U4C3 1256 aaKnown RBP7.3□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Mical1Q8VDP3 1048 aa7.29□□□□□ -1.24
Ubr4-201ENSMUST00000097822 MecomP14404 1042 aa7.29□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Ppp1r9bQ6R891 817 aaKnown RBP7.29□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Fam114a1Q9D281 569 aa7.29□□□□□ -1.24
Ubr4-201ENSMUST00000097822 Rock2P70336 1388 aa7.29□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms