RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Rundc1Q0VDN7 615 aa13.15□□□□□ -0.3
Rtn3-204ENSMUST00000088171 Shroom4Q1W617 1475 aa13.15□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Brpf1B2RRD7 1212 aa13.14□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Mbd3Q9Z2D8 285 aaKnown RBP13.14□□□□□ -0.31
Rtn3-204ENSMUST00000088171 GphnQ8BUV3 769 aaKnown RBP13.14□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Odf2A3KGV1 830 aaKnown RBP13.13□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Speer4f1Q9D5Q6 258 aa13.13□□□□□ -0.31
Rtn3-204ENSMUST00000088171 PtprkP35822 1457 aa13.13□□□□□ -0.31
Rtn3-204ENSMUST00000088171 UvssaQ9D479 717 aa13.13□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Dmrt2Q8BG36 561 aa13.13□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Cc2d2aQ8CFW7 1633 aa13.12□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Pibf1E9Q6K3 756 aa13.12□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Cabp1Q9JLK7 227 aa13.12□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Gm21190A0A0G2JGJ6 266 aa13.11□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Prdm16A2A935 1275 aa13.11□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Shq1Q7TMX5 569 aa13.11□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Hs1bp3Q3TC93 395 aa13.1□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Golga2Q921M4 999 aa13.1□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Gnl3lQ6PGG6 577 aaKnown RBP13.1□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Arhgap31A6X8Z5 1425 aa13.1□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Ccdc88bQ4QRL3 1481 aa13.1□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Fan1Q69ZT1 1020 aa13.1□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Nup155Q99P88 1391 aaKnown RBP13.09□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Gm21969J3QJZ1 289 aa13.09□□□□□ -0.31
Rtn3-204ENSMUST00000088171 Zpr1Q62384 459 aa13.08□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Cplx2P84086 134 aa13.08□□□□□ -0.32
Rtn3-204ENSMUST00000088171 AppP12023 770 aa13.08□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Prm3Q62100 101 aa13.08□□□□□ -0.32
Rtn3-204ENSMUST00000088171 CgnP59242 1191 aa13.07□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Rock2P70336 1388 aa13.07□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Frmpd1A2AKB4 1549 aa13.07□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Paf1Q8K2T8 535 aa13.07□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Krt82Q99M74 516 aa13.06□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Ddx54Q8K4L0 874 aaKnown RBP13.06□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Ccdc9Q8VC31 543 aaKnown RBP13.06□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Rbm5Q91YE7 815 aaKnown RBP13.06□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Synj1Q8CHC4 1574 aa13.05□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Sugp2Q8CH09 1067 aa13.05□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Slc4a10Q5DTL9 1118 aa13.05□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Calcoco2A2A6M5 331 aa13.04□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Dbr1Q923B1 550 aa13.04□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Plekhh2Q8C115 1491 aa13.03□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Smarce1O54941 411 aaKnown RBP13.03□□□□□ -0.32
Rtn3-204ENSMUST00000088171 ZgpatQ8VDM1 511 aa13.03□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Wdr62Q3U3T8 1523 aa13.03□□□□□ -0.32
Rtn3-204ENSMUST00000088171 PogzQ8BZH4 1409 aaKnown RBP13.03□□□□□ -0.32
Rtn3-204ENSMUST00000088171 CrebrfQ8CDG5 640 aaKnown RBP13.03□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Pcmtd1P59913 357 aa13.02□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Gsdma3Q5Y4Y6 464 aa13.02□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Evc2Q8K1G2 1220 aa13.02□□□□□ -0.32
Rtn3-204ENSMUST00000088171 TatQ8QZR1 454 aa13.02□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Plb1Q3TTY0 1478 aa13.02□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Zscan21Q07231 555 aa13.02□□□□□ -0.32
Rtn3-204ENSMUST00000088171 Klf15Q9EPW2 415 aa13.02□□□□□ -0.33
Rtn3-204ENSMUST00000088171 CrcpO35427 148 aa13.01□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Tpd52l1O54818 204 aa13.01□□□□□ -0.33
Rtn3-204ENSMUST00000088171 NexnQ7TPW1 607 aa13.01□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Anks4bQ8K3X6 423 aa13.01□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Ccer1Q9CQL2 403 aa13.01□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Nsd2Q8BVE8 1365 aa13□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Lrrcc1Q69ZB0 1026 aa13□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Gm38655A0A286YDK6 273 aa13□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Znf330Q922H9 316 aa13□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Duox2A2AQ99 1517 aa13□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Tpm3P21107 285 aaKnown RBP12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Evi5lH3BKQ3 813 aa12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 ArsiQ32KI9 573 aa12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Hspa5P20029 655 aaKnown RBP12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Mphosph9A6H5Y1 991 aa12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Tpm4Q6IRU2 248 aa12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Ccdc43Q9CR29 222 aaKnown RBP12.99□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Tpm2P58774 284 aa12.98□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Ccp110Q7TSH4 1004 aa12.98□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Mink1Q9JM52 1308 aa12.98□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Atp6v1dP57746 247 aa12.98□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Smg7Q5RJH6 1138 aaKnown RBP12.98□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Tsen2Q6P7W5 460 aa12.98□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Ksr2Q3UVC0 959 aa12.97□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Mak16Q8BGS0 296 aaKnown RBP12.97□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Znf710Q3U288 666 aa12.97□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Cep162Q6ZQ06 1403 aa12.97□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Tceal9Q9DD24 104 aa12.96□□□□□ -0.33
Rtn3-204ENSMUST00000088171 Senp3Q9EP97 568 aaKnown RBP12.96□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Gm10471E9Q1C7 252 aa12.95□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Zranb3Q6NZP1 1069 aa12.95□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Chmp5Q9D7S9 219 aa12.95□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Cgnl1Q6AW69 1298 aa12.94□□□□□ -0.34
Rtn3-204ENSMUST00000088171 B4galnt3Q6L8S8 986 aa12.94□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Cluap1Q8R3P7 413 aa12.94□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Zeb2Q9R0G7 1215 aa12.94□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Q8C5K5 320 aa12.94□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Slc5a4bQ91ZP4 660 aa12.94□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Wdhd1P59328 1117 aa12.93□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Ccdc27Q3V036 639 aa12.93□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Cetn4Q8K4K1 168 aa12.93□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Ppp4r3bQ922R5 820 aa12.93□□□□□ -0.34
Rtn3-204ENSMUST00000088171 PnisrA2AJT4 805 aaKnown RBP12.93□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Ipo7Q9EPL8 1038 aaKnown RBP12.93□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Crocc2F6XLV1 1638 aa12.92□□□□□ -0.34
Rtn3-204ENSMUST00000088171 Ttll5Q8CHB8 1328 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms