RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Cep170Q6A065 1588 aa13.01□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Gtf2e1Q9D0D5 440 aa13.01□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 BC005561E9Q5E2 1589 aa13.01□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Prex2Q3LAC4 1598 aa13.01□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 ArxO35085 564 aa13.01□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Utp14aQ640M1 767 aaKnown RBP13□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Gm1043A0A140LJC2 1431 aa12.99□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Abcc5Q9R1X5 1436 aa12.99□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Fan1Q69ZT1 1020 aa12.99□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Shq1Q7TMX5 569 aa12.99□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Slx4Q6P1D7 1565 aa12.98□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Map3k4O08648 1597 aa12.98□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Vps8Q0P5W1 1427 aa12.97□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Mapkbp1Q6NS57 1503 aa12.97□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Abca5Q8K448 1642 aa12.97□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Cd109Q8R422 1442 aa12.97□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Rangap1P46061 589 aaKnown RBP12.96□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Rrbp1Q99PL5 1605 aaKnown RBP12.96□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Ankrd36D3Z4K0 1415 aa12.96□□□□□ -0.33
Cpsf1-201ENSMUST00000071898 Usp47Q8BY87 1376 aa12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Abca16E9PWJ7 1678 aa12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Cnga1P29974 684 aa12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Ggt6Q6PDE7 497 aa12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Trappc8E9PWG2 1437 aa12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Smg6P61406 1418 aaKnown RBP12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Irx3P81067 507 aa12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Eif4g1Q6NZJ6 1600 aaKnown RBP12.95□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 PtprtQ99M80 1454 aa12.94□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Sox12Q04890 314 aa12.93□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Ttll5Q8CHB8 1328 aa12.93□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 GphnQ8BUV3 769 aaKnown RBP12.93□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Srcin1Q9QWI6 1250 aa12.92□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 CatipB9EKE5 520 aa12.91□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Apbb1Q9QXJ1 710 aa12.91□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Kdm5bQ80Y84 1544 aa12.91□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Trim26Q99PN3 545 aa12.9□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Bcl11bQ99PV8 884 aa12.9□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Abcc2Q8VI47 1543 aa12.9□□□□□ -0.34
Cpsf1-201ENSMUST00000071898 Hsp90aa1P07901 733 aaKnown RBP12.89□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Slc4a3P16283 1227 aa12.89□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Neurod2Q62414 383 aa12.89□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Znf316Q6PGE4 1016 aa12.89□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Stard8Q8K031 1019 aa12.89□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 CanxP35564 591 aaKnown RBP12.88□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Q9D9H8 365 aa12.88□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Erich3F6QRE9 1637 aa12.88□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Zscan21Q07231 555 aa12.87□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Naip2Q9QUK4 1447 aa12.87□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Rock2P70336 1388 aa12.86□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Ttc21bQ0HA38 1315 aa12.86□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Trim30dE9PWL0 497 aa12.86□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Dnmt1P13864 1620 aaKnown RBP12.86□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 CenpjQ569L8 1344 aa12.85□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Usp40Q8BWR4 1235 aa12.85□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Ap3b2Q9JME5 1082 aa12.85□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 BccipQ9CWI3 316 aa12.84□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Znf608Q56A10 1511 aa12.84□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Myom3A2ABU4 1439 aa12.83□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Mak16Q8BGS0 296 aaKnown RBP12.83□□□□□ -0.35
Cpsf1-201ENSMUST00000071898 Cfap74Q3UY96 1578 aa12.83□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Tmf1B9EKI3 1091 aa12.83□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 HdgfP51859 237 aaKnown RBP12.83□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Supt16hQ920B9 1047 aa12.83□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Tcerg1Q8CGF7 1100 aaKnown RBP12.82□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Mink1Q9JM52 1308 aa12.82□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Arhgef11Q68FM7 1552 aa12.81□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Depdc5P61460 1591 aa12.81□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Rfx7F8VPJ6 1459 aa12.81□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Dennd4bQ3U1Y4 1499 aa12.81□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Pcdh10E9PXQ7 1057 aa12.81□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Dhx9O70133 1380 aaKnown RBP12.81□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 NpatQ8BMA5 1420 aa12.8□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Hsp90ab1P11499 724 aaKnown RBP12.8□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Puf60Q3UEB3 564 aaKnown RBP12.8□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Synj2Q9D2G5 1434 aa12.8□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Znf710Q3U288 666 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Atf3Q60765 181 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Dbr1Q923B1 550 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Rwdd1Q9CQK7 243 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Dapk1Q80YE7 1442 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Ccdc27Q3V036 639 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 B4galnt3Q6L8S8 986 aa12.79□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Nolc1E9Q5C9 702 aaKnown RBP12.78□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Col17a1Q07563 1470 aa12.78□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Adcy10Q8C0T9 1614 aa12.78□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Peg3Q3URU2 1571 aa12.78□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Lmo7E9PYF4 1699 aaKnown RBP12.78□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 3425401B19RikD3Z1D3 1412 aa12.77□□□□□ -0.36
Cpsf1-201ENSMUST00000071898 Gtf3c3Q3TMP1 882 aa12.77□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Mbd3Q9Z2D8 285 aaKnown RBP12.77□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Evi5lH3BKQ3 813 aa12.77□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Ecm2Q5FW85 670 aa12.77□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Ptch1Q61115 1434 aa12.76□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Zfp777B9EKF4 885 aa12.76□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Speer4f1Q9D5Q6 258 aa12.76□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Arhgef40Q3UPH7 1517 aa12.76□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Ylpm1Q9R0I7 1386 aaKnown RBP12.76□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Mapk8ip3Q9ESN9 1337 aa12.75□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Lmtk2Q3TYD6 1471 aa12.75□□□□□ -0.37
Cpsf1-201ENSMUST00000071898 Zcchc11B2RX14 1644 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 243.4 ms