RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Ssh2Q5SW75 1423 aa15.61■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Pelp1Q9DBD5 1123 aaKnown RBP15.6■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Rnf17Q99MV7 1640 aa15.6■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Samd1D3YXK1 519 aa15.6■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Wdr7Q920I9 1489 aa15.59■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Rtl5Q5DTT4 599 aa15.59■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Grwd1Q810D6 446 aaKnown RBP15.59■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Atp10dQ8K2X1 1416 aa15.59■□□□□ 0.09
Ddx55-201ENSMUST00000071057 Znf608Q56A10 1511 aa15.58■□□□□ 0.09
Ddx55-201ENSMUST00000071057 AampJ3QN89 436 aa15.58■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Smg6P61406 1418 aaKnown RBP15.58■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Hnrnpul2Q00PI9 745 aaKnown RBP15.58■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Lrrc9Q8CDN9 1456 aa15.57■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Adgrl2Q8JZZ7 1487 aa15.57■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Ncoa1P70365 1447 aa15.56■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Slc24a1Q91WD8 1130 aa15.56■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Fbxo3Q9DC63 480 aa15.56■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Ipo4Q8VI75 1082 aa15.55■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Dapk1Q80YE7 1442 aa15.55■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Rundc1Q0VDN7 615 aa15.54■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Ythdc2B2RR83 1445 aaKnown RBP15.54■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Clstn2Q9ER65 966 aa15.54■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Asxl1P59598 1514 aa15.54■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Pdcd11Q6NS46 1862 aaKnown RBP15.54■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Map3k5O35099 1380 aa15.53■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Cfap74Q3UY96 1578 aa15.53■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Cep170Q6A065 1588 aa15.52■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Abca8bQ8K440 1620 aa15.52■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Tshz2Q68FE9 1030 aa15.52■□□□□ 0.08
Ddx55-201ENSMUST00000071057 Mug2P28666 1451 aa15.52■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Arid3cA6PWV5 409 aa15.52■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Vgll3P85442 326 aa15.52■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Kiaa1210E9Q0C6 1637 aa15.51■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Stra8P70278 393 aa15.51■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Cdc42bpbQ7TT50 1713 aa15.51■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Card11Q8CIS0 1159 aa15.51■□□□□ 0.07
Ddx55-201ENSMUST00000071057 PtprgQ05909 1442 aa15.5■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Cd109Q8R422 1442 aa15.5■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Mbd5B1AYB6 1498 aa15.5■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Spag9Q58A65 1321 aaKnown RBP15.5■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Mast1Q9R1L5 1570 aa15.5■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Gapvd1Q6PAR5 1458 aa15.49■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Cdk13Q69ZA1 1511 aaKnown RBP15.49■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Abcc3B2RX12 1523 aa15.48■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Adgrl3Q80TS3 1537 aa15.48■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Dot1lQ6XZL8 1540 aa15.48■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Znf326O88291 580 aa15.47■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Znf710Q3U288 666 aa15.47■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Myom3A2ABU4 1439 aa15.47■□□□□ 0.07
Ddx55-201ENSMUST00000071057 AI481877A2ALV5 1481 aa15.47■□□□□ 0.07
Ddx55-201ENSMUST00000071057 PtprtQ99M80 1454 aa15.47■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Igf1rQ60751 1373 aa15.47■□□□□ 0.07
Ddx55-201ENSMUST00000071057 Atp7aQ64430 1491 aa15.46■□□□□ 0.07
Ddx55-201ENSMUST00000071057 DroshaQ5HZJ0 1373 aaKnown RBP15.46■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Washc2Q6PGL7 1334 aa15.46■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Zbtb4Q5F293 982 aa15.46■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Anp32bQ9EST5 272 aaKnown RBP15.46■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Hecw1Q8K4P8 1604 aa15.45■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Cwc22Q8C5N3 908 aaKnown RBP15.45■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Prdm16A2A935 1275 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Irx3P81067 507 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Wwc2Q6NXJ0 1187 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 NgefQ8CHT1 710 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Rtn4Q99P72 1162 aaKnown RBP15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Pde4cQ3UEI1 686 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Mrs2Q5NCE8 434 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Kidins220E9Q9B7 1793 aa15.44■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Neurl4Q5NCX5 1563 aa15.43■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Tnnt3Q9QZ47 272 aa15.41■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Erich6D3Z6S9 713 aa15.41■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Naip6Q9JIB6 1403 aa15.41■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Tarbp1E9Q368 1579 aa15.4■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Exoc6Q8R313 802 aa15.4■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Rock1P70335 1354 aa15.4■□□□□ 0.06
Ddx55-201ENSMUST00000071057 Taok2Q6ZQ29 1240 aa15.4■□□□□ 0.06
Ddx55-201ENSMUST00000071057 RalgapbQ8BQZ4 1484 aa15.39■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Gm13695A2AK44 830 aa15.39■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Ifit1bl1D3Z6F0 470 aa15.38■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Polr3aB2RXC6 1390 aa15.38■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Cpsf1Q9EPU4 1441 aaKnown RBP15.38■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Usp54Q8BL06 1588 aaKnown RBP15.38■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Kif3bQ61771 747 aa15.37■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Plekhg5Q66T02 1073 aa15.36■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Iqgap1Q9JKF1 1657 aaKnown RBP15.36■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Zfyve16Q80U44 1528 aa15.36■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Lemd3Q9WU40 921 aa15.36■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Mroh3A0A1D5RM54 893 aa15.35■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Kif1bQ60575 1816 aaKnown RBP15.35■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Slc4a2P13808 1237 aaKnown RBP15.35■□□□□ 0.05
Ddx55-201ENSMUST00000071057 ShprhQ7TPQ3 1674 aa15.34■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Podxl2Q8CAE9 603 aa15.34■□□□□ 0.05
Ddx55-201ENSMUST00000071057 Xrn1P97789 1719 aaKnown RBP15.34■□□□□ 0.05
Ddx55-201ENSMUST00000071057 SafbD3YXK2 937 aaKnown RBP15.34■□□□□ 0.05
Ddx55-201ENSMUST00000071057 4930567H17RikQ3V0K5 233 aa15.33■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Abca9Q8K449 1623 aa15.33■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Robo2Q7TPD3 1470 aa15.33■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Edc4Q3UJB9 1406 aaKnown RBP15.32■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Upf2A2AT37 1269 aaKnown RBP15.31■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Gm156Q58A37 223 aa15.3■□□□□ 0.04
Ddx55-201ENSMUST00000071057 Nsd2Q8BVE8 1365 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms