RNA–Protein interactions for RNA: ENSMUST00000057254.5

Ubqln3-201, Transcript of Ubiquilin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubqln3, Length 2,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3-201ENSMUST00000057254 Igf1rQ60751 1373 aa12.41□□□□□ -0.42
Ubqln3-201ENSMUST00000057254 Atp7aQ64430 1491 aa12.41□□□□□ -0.42
Ubqln3-201ENSMUST00000057254 Spag9Q58A65 1321 aaKnown RBP12.41□□□□□ -0.42
Ubqln3-201ENSMUST00000057254 Dapk1Q80YE7 1442 aa12.41□□□□□ -0.42
Ubqln3-201ENSMUST00000057254 Usp54Q8BL06 1588 aaKnown RBP12.4□□□□□ -0.42
Ubqln3-201ENSMUST00000057254 Neurl4Q5NCX5 1563 aa12.39□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Tarbp1E9Q368 1579 aa12.39□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 ShprhQ7TPQ3 1674 aa12.39□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Abca17E9PX95 1733 aa12.39□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Rundc1Q0VDN7 615 aa12.38□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Pabpn1Q8CCS6 302 aaKnown RBP12.38□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Iqgap1Q9JKF1 1657 aaKnown RBP12.38□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Washc2Q6PGL7 1334 aa12.38□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Kif1bQ60575 1816 aaKnown RBP12.38□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Csrnp3P59055 597 aa12.37□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Pde4cQ3UEI1 686 aa12.37□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Smg6P61406 1418 aaKnown RBP12.37□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Myom3A2ABU4 1439 aa12.36□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Zbtb4Q5F293 982 aa12.36□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Myo5cE9Q1F5 1742 aa12.35□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Clstn2Q9ER65 966 aa12.35□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Prdm16A2A935 1275 aa12.34□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Ak9G3UYQ4 1894 aa12.34□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Card11Q8CIS0 1159 aa12.34□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Robo2Q7TPD3 1470 aa12.33□□□□□ -0.43
Ubqln3-201ENSMUST00000057254 Slc24a1Q91WD8 1130 aa12.33□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Erich6D3Z6S9 713 aa12.32□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Naip6Q9JIB6 1403 aa12.32□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Kif3bQ61771 747 aa12.32□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 DroshaQ5HZJ0 1373 aaKnown RBP12.31□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 RalgapbQ8BQZ4 1484 aa12.31□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Rock1P70335 1354 aa12.3□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Gm156Q58A37 223 aa12.3□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Lemd3Q9WU40 921 aa12.3□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Sall3Q62255 1320 aa12.29□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Edc4Q3UJB9 1406 aaKnown RBP12.29□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Adamts13Q769J6 1426 aa12.29□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Cpsf1Q9EPU4 1441 aaKnown RBP12.29□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Nos1Q9Z0J4 1429 aa12.29□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Polr3aB2RXC6 1390 aa12.29□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Abca6Q8K441 1624 aa12.28□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Ifit1bl1D3Z6F0 470 aa12.28□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Fndc1E9Q043 1732 aa12.28□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Wwc2Q6NXJ0 1187 aa12.27□□□□□ -0.44
Ubqln3-201ENSMUST00000057254 Ptch1Q61115 1434 aa12.26□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Znf710Q3U288 666 aa12.26□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Col17a1Q07563 1470 aa12.26□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Exoc6Q8R313 802 aa12.25□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Tulp4Q9JIL5 1547 aa12.24□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Depdc5P61460 1591 aa12.24□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Cwc22Q8C5N3 908 aaKnown RBP12.24□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Znf518aB2RRF6 1478 aaKnown RBP12.24□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 OvosQ3UU35 1456 aa12.24□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Mroh3A0A1D5RM54 893 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Gm38655A0A286YDK6 273 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Mrs2Q5NCE8 434 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Cul9Q80TT8 1865 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Prex1Q69ZK0 1650 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Ppip5k1A2ARP1 1436 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Nsd2Q8BVE8 1365 aa12.23□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Tmem131lQ3U3D7 1597 aa12.22□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Plekhg5Q66T02 1073 aa12.21□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Kdm5cP41230 1554 aa12.21□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Abcc6Q9R1S7 1498 aa12.21□□□□□ -0.45
Ubqln3-201ENSMUST00000057254 Slc4a2P13808 1237 aaKnown RBP12.21□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Kdm2aP59997 1161 aa12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Stk24Q99KH8 431 aa12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Ttc21bQ0HA38 1315 aa12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Prdm2A2A7B5 1709 aaKnown RBP12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Adgrl3Q80TS3 1537 aa12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 AdgbG3UZ78 1657 aa12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Gm13695A2AK44 830 aa12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Ylpm1Q9R0I7 1386 aaKnown RBP12.2□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Iqgap3F8VQ29 1632 aa12.19□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 AnkarA2RT91 1465 aa12.19□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Gli2Q0VGT2 1544 aa12.19□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Dip2cE9PWR4 1557 aa12.19□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Topbp1Q6ZQF0 1515 aa12.18□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Tubgcp6G5E8P0 1769 aa12.18□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 RereQ80TZ9 1558 aa12.17□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Uggt2E9Q4X2 1504 aa12.17□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Clasp1Q80TV8 1535 aaKnown RBP12.17□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Setd1aE9PYH6 1716 aa12.16□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Stra8P70278 393 aa12.16□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Cfap65Q3V0B4 1847 aa12.16□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 AglF8VPN4 1532 aa12.16□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Rock2P70336 1388 aa12.16□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Atp10aO54827 1508 aa12.15□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Yeats2Q3TUF7 1407 aa12.15□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 1700123L14RikQ3V2K7 440 aa12.15□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 Abca8aQ8K442 1620 aa12.15□□□□□ -0.46
Ubqln3-201ENSMUST00000057254 SafbD3YXK2 937 aaKnown RBP12.14□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 Ehbp1l1Q99MS7 1716 aa12.13□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 Cdc42bpgQ80UW5 1551 aa12.13□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 ErbinQ80TH2 1402 aa12.13□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 Plch2A2AP18 1501 aa12.12□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 PnisrA2AJT4 805 aaKnown RBP12.12□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 Ppp1r18Q8BQ30 594 aa12.12□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 Os9Q8K2C7 672 aa12.12□□□□□ -0.47
Ubqln3-201ENSMUST00000057254 Myo3aQ8K3H5 1613 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms