RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Arid3cA6PWV5 409 aa8.81□□□□□ -1
Smc1a-201ENSMUST00000045312 AampJ3QN89 436 aa8.81□□□□□ -1
Smc1a-201ENSMUST00000045312 Chmp4bQ9D8B3 224 aaKnown RBP8.81□□□□□ -1
Smc1a-201ENSMUST00000045312 WrnO09053 1401 aa8.81□□□□□ -1
Smc1a-201ENSMUST00000045312 Irx6Q9ER75 438 aa8.81□□□□□ -1
Smc1a-201ENSMUST00000045312 Kcnh8P59111 1102 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Znf330Q922H9 316 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 MccE9PWI3 1003 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Map3k1P53349 1493 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Duox2A2AQ99 1517 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Ubap1lG3UW59 384 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Vgll3P85442 326 aa8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Pdia4P08003 638 aaKnown RBP8.8□□□□□ -1
Smc1a-201ENSMUST00000045312 Stk24Q99KH8 431 aa8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 Wdr62Q3U3T8 1523 aa8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 1700019A02RikA0A087WPV9 146 aa8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 PnnO35691 725 aaKnown RBP8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 Trak1Q6PD31 939 aa8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 Mrc2Q64449 1479 aa8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 Ppp1r18Q8BQ30 594 aa8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 PogzQ8BZH4 1409 aaKnown RBP8.79□□□□□ -1
Smc1a-201ENSMUST00000045312 Prkrip1Q9CWV6 186 aaKnown RBP8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Top2bQ64511 1612 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Grin2bQ01097 1482 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Taf3Q5HZG4 932 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Tmco5bQ80X59 307 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Ncoa2Q61026 1462 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Cspp1B2RX88 1205 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Znf771Q8BJ90 317 aa8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Exosc9Q9JHI7 438 aaKnown RBP8.78□□□□□ -1
Smc1a-201ENSMUST00000045312 Cux1P53564 1515 aa8.77□□□□□ -1
Smc1a-201ENSMUST00000045312 SetQ9EQU5 289 aaKnown RBP8.77□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Nup155Q99P88 1391 aaKnown RBP8.77□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Urb2E9Q7L1 1524 aaKnown RBP8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Rnf214Q8BFU3 668 aaKnown RBP8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ccdc183A2AJB1 534 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Pnmal2G3X9N3 661 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Rabep1O35551 862 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ecm2Q5FW85 670 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Jph4Q80WT0 628 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 KarsQ99MN1 595 aaKnown RBP8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Zfp777B9EKF4 885 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Cald1E9QA15 768 aaKnown RBP8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Cnga1P29974 684 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Golga2Q921M4 999 aa8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ylpm1Q9R0I7 1386 aaKnown RBP8.76□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Rsph4aQ8BYM7 716 aa8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Pes1Q9EQ61 584 aaKnown RBP8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Dusp27Q148W8 1138 aa8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 CrebrfQ8CDG5 640 aaKnown RBP8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Sart1Q9Z315 806 aaKnown RBP8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 HnrnpuQ8VEK3 800 aaKnown RBP8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Rad54l2Q99NG0 1466 aa8.75□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Casq1O09165 405 aa8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Tpd52l1O54818 204 aa8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Slc4a2P13808 1237 aaKnown RBP8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Sf3a1Q8K4Z5 791 aaKnown RBP8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Utp3Q9JI13 469 aaKnown RBP8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Mrvi1Q9WUX5 899 aaKnown RBP8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Soga1E1U8D0 1418 aa8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Stag3O70576 1240 aa8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Kif3aP28741 701 aa8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Tnpo1Q8BFY9 898 aaKnown RBP8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Mroh2bQ7M6Y6 1581 aa8.74□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Kif20aP97329 887 aa8.73□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ksr2Q3UVC0 959 aa8.73□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ralbp1Q62172 648 aa8.73□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Gripap1Q8VD04 806 aa8.73□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Kif3bQ61771 747 aa8.72□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Camsap1A2AHC3 1581 aa8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Cc2d2bA0A286YDU8 1405 aa8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ifit1bl1D3Z6F0 470 aa8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ccdc146E9Q9F7 977 aa8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Esx1O88933 382 aa8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Pabpn1Q8CCS6 302 aaKnown RBP8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Glipr1l2Q9CQ35 332 aa8.71□□□□□ -1.01
Smc1a-201ENSMUST00000045312 Ssh1Q76I79 1042 aa8.71□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Lamc3Q9R0B6 1581 aa8.71□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Tmf1B9EKI3 1091 aa8.71□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Dixdc1Q80Y83 711 aa8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 U2af1Q9D883 239 aaKnown RBP8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Naip1Q9QWK5 1403 aa8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Kif4P33174 1231 aa8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Fez1Q8K0X8 392 aa8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Iffo2Q8R2V2 512 aa8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Gtf2e1Q9D0D5 440 aa8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Senp3Q9EP97 568 aaKnown RBP8.7□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Cbx1P83917 185 aaKnown RBP8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Anp32eP97822 260 aaKnown RBP8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Ift140E9PY46 1464 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Atp6v1dP57746 247 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Polr3gQ6NXY9 223 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Liat1Q810M6 228 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Plcd3Q8K2J0 785 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 AcrbpQ3V140 540 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 U2surpQ6NV83 1029 aaKnown RBP8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Dcaf11Q91VU6 549 aa8.69□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Kif16bB1AVY7 1312 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 St18Q80TY4 1045 aa8.68□□□□□ -1.02
Smc1a-201ENSMUST00000045312 Gm7298A0A0N4SVU1 1476 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms