RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Inpp5dQ9ES52 1191 aa12.2□□□□□ -0.46
Syne1-201ENSMUST00000041639 Rapgef2Q8CHG7 1496 aa12.2□□□□□ -0.46
Syne1-201ENSMUST00000041639 Ddrgk1Q80WW9 315 aa12.19□□□□□ -0.46
Syne1-201ENSMUST00000041639 Rsph3aQ3UFY4 516 aa12.19□□□□□ -0.46
Syne1-201ENSMUST00000041639 Ccdc60Q8C4J0 545 aa12.19□□□□□ -0.46
Syne1-201ENSMUST00000041639 Atp6v1dP57746 247 aa12.19□□□□□ -0.46
Syne1-201ENSMUST00000041639 Slc4a10Q5DTL9 1118 aa12.18□□□□□ -0.46
Syne1-201ENSMUST00000041639 Trim30aP15533 496 aa12.18□□□□□ -0.46
Syne1-201ENSMUST00000041639 Ccnb3Q810T2 1396 aa12.18□□□□□ -0.46
Syne1-201ENSMUST00000041639 Ylpm1Q9R0I7 1386 aaKnown RBP12.18□□□□□ -0.46
Syne1-201ENSMUST00000041639 VgfQ0VGU4 617 aa12.18□□□□□ -0.46
Syne1-201ENSMUST00000041639 Becn1O88597 448 aa12.18□□□□□ -0.46
Syne1-201ENSMUST00000041639 Ccer1Q9CQL2 403 aa12.17□□□□□ -0.46
Syne1-201ENSMUST00000041639 Utp14aQ640M1 767 aaKnown RBP12.17□□□□□ -0.46
Syne1-201ENSMUST00000041639 Ggt6Q6PDE7 497 aa12.17□□□□□ -0.46
Syne1-201ENSMUST00000041639 Sart1Q9Z315 806 aaKnown RBP12.17□□□□□ -0.46
Syne1-201ENSMUST00000041639 Esx1O88933 382 aa12.16□□□□□ -0.46
Syne1-201ENSMUST00000041639 Pds5bQ4VA53 1446 aaKnown RBP12.16□□□□□ -0.46
Syne1-201ENSMUST00000041639 Rfx1P48377 963 aa12.16□□□□□ -0.46
Syne1-201ENSMUST00000041639 Cc2d1aQ8K1A6 943 aa12.15□□□□□ -0.46
Syne1-201ENSMUST00000041639 Sf3a1Q8K4Z5 791 aaKnown RBP12.15□□□□□ -0.46
Syne1-201ENSMUST00000041639 CenpjQ569L8 1344 aa12.15□□□□□ -0.46
Syne1-201ENSMUST00000041639 Dnai2A2AC93 623 aa12.14□□□□□ -0.47
Syne1-201ENSMUST00000041639 Rock1P70335 1354 aa12.14□□□□□ -0.47
Syne1-201ENSMUST00000041639 Stk31Q99MW1 1018 aa12.14□□□□□ -0.47
Syne1-201ENSMUST00000041639 Eif2s2Q99L45 331 aaKnown RBP12.14□□□□□ -0.47
Syne1-201ENSMUST00000041639 Cgnl1Q6AW69 1298 aa12.14□□□□□ -0.47
Syne1-201ENSMUST00000041639 Stard8Q8K031 1019 aa12.14□□□□□ -0.47
Syne1-201ENSMUST00000041639 Cspp1B2RX88 1205 aa12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 G3bp1P97855 465 aaKnown RBP12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 Filip1lQ6P6L0 1131 aa12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 GsdmaQ9EST1 446 aa12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 Mre11Q61216 706 aa12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 Dhx57Q6P5D3 1388 aaKnown RBP12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 St18Q80TY4 1045 aa12.13□□□□□ -0.47
Syne1-201ENSMUST00000041639 4933402E13RikQ9D4D2 429 aa12.12□□□□□ -0.47
Syne1-201ENSMUST00000041639 Ak7Q9D2H2 614 aa12.12□□□□□ -0.47
Syne1-201ENSMUST00000041639 Ush1cQ9ES64 910 aa12.12□□□□□ -0.47
Syne1-201ENSMUST00000041639 Cux2P70298 1426 aa12.12□□□□□ -0.47
Syne1-201ENSMUST00000041639 Kif7B7ZNG0 1348 aa12.11□□□□□ -0.47
Syne1-201ENSMUST00000041639 Casq1O09165 405 aa12.11□□□□□ -0.47
Syne1-201ENSMUST00000041639 Usp40Q8BWR4 1235 aa12.11□□□□□ -0.47
Syne1-201ENSMUST00000041639 UacaQ8CGB3 1411 aa12.11□□□□□ -0.47
Syne1-201ENSMUST00000041639 HdgfP51859 237 aaKnown RBP12.11□□□□□ -0.47
Syne1-201ENSMUST00000041639 Fam184bQ0KK56 942 aa12.1□□□□□ -0.47
Syne1-201ENSMUST00000041639 Carmil1Q6EDY6 1374 aa12.1□□□□□ -0.47
Syne1-201ENSMUST00000041639 Tpd52l1O54818 204 aa12.1□□□□□ -0.47
Syne1-201ENSMUST00000041639 Cabp4Q8VHC5 271 aa12.1□□□□□ -0.47
Syne1-201ENSMUST00000041639 Tpm3P21107 285 aaKnown RBP12.09□□□□□ -0.47
Syne1-201ENSMUST00000041639 Sh3bgrQ9WUZ7 214 aa12.09□□□□□ -0.47
Syne1-201ENSMUST00000041639 Ap3b2Q9JME5 1082 aa12.08□□□□□ -0.47
Syne1-201ENSMUST00000041639 Nap1l3Q794H2 544 aa12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 Utp3Q9JI13 469 aaKnown RBP12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 CftrP26361 1476 aa12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 Ralbp1Q62172 648 aa12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 Dapk1Q80YE7 1442 aa12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 Samd1D3YXK1 519 aa12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 SetQ9EQU5 289 aaKnown RBP12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 BccipQ9CWI3 316 aa12.08□□□□□ -0.48
Syne1-201ENSMUST00000041639 Polr3gQ6NXY9 223 aa12.07□□□□□ -0.48
Syne1-201ENSMUST00000041639 Zscan10Q3URR7 782 aa12.07□□□□□ -0.48
Syne1-201ENSMUST00000041639 AppP12023 770 aa12.07□□□□□ -0.48
Syne1-201ENSMUST00000041639 Tomm22Q9CPQ3 142 aa12.07□□□□□ -0.48
Syne1-201ENSMUST00000041639 Pak3Q61036 559 aa12.07□□□□□ -0.48
Syne1-201ENSMUST00000041639 Chmp4cQ9D7F7 232 aa12.07□□□□□ -0.48
Syne1-201ENSMUST00000041639 Mink1Q9JM52 1308 aa12.06□□□□□ -0.48
Syne1-201ENSMUST00000041639 Triml2E9PW10 424 aa12.06□□□□□ -0.48
Syne1-201ENSMUST00000041639 Trim58Q5NCC9 485 aa12.06□□□□□ -0.48
Syne1-201ENSMUST00000041639 Cecr2E9Q2Z1 1453 aa12.06□□□□□ -0.48
Syne1-201ENSMUST00000041639 Rpgrip1lQ8CG73 1264 aa12.06□□□□□ -0.48
Syne1-201ENSMUST00000041639 Phactr2B1AVP0 632 aa12.05□□□□□ -0.48
Syne1-201ENSMUST00000041639 Shq1Q7TMX5 569 aa12.05□□□□□ -0.48
Syne1-201ENSMUST00000041639 MlecQ6ZQI3 291 aaKnown RBP12.05□□□□□ -0.48
Syne1-201ENSMUST00000041639 KarsQ99MN1 595 aaKnown RBP12.04□□□□□ -0.48
Syne1-201ENSMUST00000041639 Glipr1l2Q9CQ35 332 aa12.04□□□□□ -0.48
Syne1-201ENSMUST00000041639 Isy1Q69ZQ2 285 aaKnown RBP12.04□□□□□ -0.48
Syne1-201ENSMUST00000041639 Ccdc30Q8BVF4 654 aa12.04□□□□□ -0.48
Syne1-201ENSMUST00000041639 Ccdc47Q9D024 483 aaKnown RBP12.04□□□□□ -0.48
Syne1-201ENSMUST00000041639 Gm21969J3QJZ1 289 aa12.03□□□□□ -0.48
Syne1-201ENSMUST00000041639 Rabep1O35551 862 aa12.03□□□□□ -0.48
Syne1-201ENSMUST00000041639 Drc7Q6V3W6 876 aa12.03□□□□□ -0.48
Syne1-201ENSMUST00000041639 Pank1Q8K4K6 548 aa12.03□□□□□ -0.48
Syne1-201ENSMUST00000041639 Fbxo2Q80UW2 297 aa12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 Tceal9Q9DD24 104 aa12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 Arid4aF8VPQ2 1261 aaKnown RBP12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 Ubap1lG3UW59 384 aa12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 Synj1Q8CHC4 1574 aa12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 Vps53Q8CCB4 832 aa12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 IbspQ61711 324 aa12.02□□□□□ -0.49
Syne1-201ENSMUST00000041639 Nectin2P32507 530 aa12.01□□□□□ -0.49
Syne1-201ENSMUST00000041639 Kif16bB1AVY7 1312 aa12.01□□□□□ -0.49
Syne1-201ENSMUST00000041639 KinQ8K339 391 aa12.01□□□□□ -0.49
Syne1-201ENSMUST00000041639 Krt82Q99M74 516 aa12.01□□□□□ -0.49
Syne1-201ENSMUST00000041639 Gripap1Q8VD04 806 aa12.01□□□□□ -0.49
Syne1-201ENSMUST00000041639 Bicd2Q921C5 820 aa12.01□□□□□ -0.49
Syne1-201ENSMUST00000041639 Gabpb2P81069 414 aa12□□□□□ -0.49
Syne1-201ENSMUST00000041639 Q9D2X8 372 aa12□□□□□ -0.49
Syne1-201ENSMUST00000041639 Nutm1Q8BHP2 1126 aa12□□□□□ -0.49
Syne1-201ENSMUST00000041639 Kif4P33174 1231 aa12□□□□□ -0.49
Syne1-201ENSMUST00000041639 Usp16Q99LG0 825 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms