RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Atp7aQ64430 1491 aa12.79□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Cd109Q8R422 1442 aa12.79□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Gm38655A0A286YDK6 273 aa12.79□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Dapk1Q80YE7 1442 aa12.79□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Spag9Q58A65 1321 aaKnown RBP12.79□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Grwd1Q810D6 446 aaKnown RBP12.78□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Cep170Q6A065 1588 aa12.77□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Usp54Q8BL06 1588 aaKnown RBP12.77□□□□□ -0.36
Cldn1-201ENSMUST00000023154 DroshaQ5HZJ0 1373 aaKnown RBP12.77□□□□□ -0.36
Cldn1-201ENSMUST00000023154 Abca17E9PX95 1733 aa12.77□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Tarbp1E9Q368 1579 aa12.77□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Smg6P61406 1418 aaKnown RBP12.77□□□□□ -0.37
Cldn1-201ENSMUST00000023154 ShprhQ7TPQ3 1674 aa12.77□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Iqgap1Q9JKF1 1657 aaKnown RBP12.77□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Robo2Q7TPD3 1470 aa12.76□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Prdm16A2A935 1275 aa12.75□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Rundc1Q0VDN7 615 aa12.75□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Clstn2Q9ER65 966 aa12.75□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Myom3A2ABU4 1439 aa12.75□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Washc2Q6PGL7 1334 aa12.75□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Hnrnpul2Q00PI9 745 aaKnown RBP12.75□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Pde4cQ3UEI1 686 aa12.74□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Pabpn1Q8CCS6 302 aaKnown RBP12.74□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Kif1bQ60575 1816 aaKnown RBP12.73□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Naip6Q9JIB6 1403 aa12.73□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Rock1P70335 1354 aa12.72□□□□□ -0.37
Cldn1-201ENSMUST00000023154 Card11Q8CIS0 1159 aa12.71□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Cpsf1Q9EPU4 1441 aaKnown RBP12.71□□□□□ -0.38
Cldn1-201ENSMUST00000023154 RalgapbQ8BQZ4 1484 aa12.71□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Myo5cE9Q1F5 1742 aa12.7□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Polr3aB2RXC6 1390 aa12.69□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Nos1Q9Z0J4 1429 aa12.69□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Edc4Q3UJB9 1406 aaKnown RBP12.68□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Adamts13Q769J6 1426 aa12.68□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Lemd3Q9WU40 921 aa12.66□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Ppip5k1A2ARP1 1436 aa12.66□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Ak9G3UYQ4 1894 aa12.66□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Kif3bQ61771 747 aa12.66□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Gm156Q58A37 223 aa12.66□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Fndc1E9Q043 1732 aa12.65□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Znf710Q3U288 666 aa12.65□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Cwc22Q8C5N3 908 aaKnown RBP12.65□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Slc24a1Q91WD8 1130 aa12.65□□□□□ -0.38
Cldn1-201ENSMUST00000023154 Abca6Q8K441 1624 aa12.64□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Plekhg5Q66T02 1073 aa12.64□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Ifit1bl1D3Z6F0 470 aa12.63□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Znf518aB2RRF6 1478 aaKnown RBP12.63□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Sall3Q62255 1320 aa12.63□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Zbtb4Q5F293 982 aa12.63□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Erich6D3Z6S9 713 aa12.62□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Tulp4Q9JIL5 1547 aa12.62□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Nsd2Q8BVE8 1365 aa12.62□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Col17a1Q07563 1470 aa12.62□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Wwc2Q6NXJ0 1187 aa12.62□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Tmem131lQ3U3D7 1597 aa12.62□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Kdm5cP41230 1554 aa12.61□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Ptch1Q61115 1434 aa12.61□□□□□ -0.39
Cldn1-201ENSMUST00000023154 OvosQ3UU35 1456 aa12.61□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Gm13695A2AK44 830 aa12.6□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Exoc6Q8R313 802 aa12.6□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Aplp2Q06335 707 aa12.6□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Ylpm1Q9R0I7 1386 aaKnown RBP12.6□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Prex1Q69ZK0 1650 aa12.59□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Mroh3A0A1D5RM54 893 aa12.59□□□□□ -0.39
Cldn1-201ENSMUST00000023154 AnkarA2RT91 1465 aa12.59□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Mrs2Q5NCE8 434 aa12.59□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Abcc6Q9R1S7 1498 aa12.59□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Slc4a2P13808 1237 aaKnown RBP12.58□□□□□ -0.39
Cldn1-201ENSMUST00000023154 Topbp1Q6ZQF0 1515 aa12.58□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Depdc5P61460 1591 aa12.58□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Ttc21bQ0HA38 1315 aa12.57□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Iqgap3F8VQ29 1632 aa12.57□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Stra8P70278 393 aa12.57□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Uggt2E9Q4X2 1504 aa12.57□□□□□ -0.4
Cldn1-201ENSMUST00000023154 SafbD3YXK2 937 aaKnown RBP12.57□□□□□ -0.4
Cldn1-201ENSMUST00000023154 AglF8VPN4 1532 aa12.56□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Tubgcp6G5E8P0 1769 aa12.56□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Atp10aO54827 1508 aa12.56□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Adgrl3Q80TS3 1537 aa12.56□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Setd1aE9PYH6 1716 aa12.56□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Dip2cE9PWR4 1557 aa12.56□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Gli2Q0VGT2 1544 aa12.55□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Clasp1Q80TV8 1535 aaKnown RBP12.55□□□□□ -0.4
Cldn1-201ENSMUST00000023154 AdgbG3UZ78 1657 aa12.55□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Rock2P70336 1388 aa12.54□□□□□ -0.4
Cldn1-201ENSMUST00000023154 CenpbP27790 599 aa12.54□□□□□ -0.4
Cldn1-201ENSMUST00000023154 RereQ80TZ9 1558 aa12.54□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Abca8aQ8K442 1620 aa12.54□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Prdm2A2A7B5 1709 aaKnown RBP12.53□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Stk24Q99KH8 431 aa12.53□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Tnnt3Q9QZ47 272 aa12.53□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Cul9Q80TT8 1865 aa12.53□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Plch2A2AP18 1501 aa12.53□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Cdc42bpgQ80UW5 1551 aa12.53□□□□□ -0.4
Cldn1-201ENSMUST00000023154 Kdm2aP59997 1161 aa12.52□□□□□ -0.4
Cldn1-201ENSMUST00000023154 PnisrA2AJT4 805 aaKnown RBP12.52□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Kiaa0556Q8C753 1610 aa12.51□□□□□ -0.41
Cldn1-201ENSMUST00000023154 ErbinQ80TH2 1402 aa12.5□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Yeats2Q3TUF7 1407 aa12.5□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Ehbp1l1Q99MS7 1716 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms