RNA–Protein interactions for RNA: ENSMUST00000020971.13

Rnf144a-201, Transcript of E3 ubiquitin-protein ligase RNF144A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf144a, Length 5,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144a-201ENSMUST00000020971 SlkO54988 1233 aa17.43■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Zfp444Q3TDV8 331 aaKnown RBP17.43■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Mre11Q61216 706 aa17.43■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Kif7B7ZNG0 1348 aa17.43■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Ccar1Q8CH18 1146 aaKnown RBP17.42■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Lemd3Q9WU40 921 aa17.41■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Tsen2Q6P7W5 460 aa17.4■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 HnrnpuQ8VEK3 800 aaKnown RBP17.4■□□□□ 0.38
Rnf144a-201ENSMUST00000020971 Efcab5A0JP43 1406 aa17.39■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Rad54l2Q99NG0 1466 aa17.38■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Cc2d2bA0A286YDU8 1405 aa17.38■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Znf316Q6PGE4 1016 aa17.38■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Taok2Q6ZQ29 1240 aa17.38■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Ccdc30Q8BVF4 654 aa17.38■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Plcd4Q8K3R3 807 aa17.37■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Usp40Q8BWR4 1235 aa17.36■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Ift140E9PY46 1464 aa17.36■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Tiam1Q60610 1591 aa17.36■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Pank1Q8K4K6 548 aa17.36■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 NrkQ9R0G8 1455 aa17.35■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Cux1P53564 1515 aa17.35■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Pibf1E9Q6K3 756 aa17.34■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Ccdc60Q8C4J0 545 aa17.34■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 KarsQ99MN1 595 aaKnown RBP17.34■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 L3mbtl2P59178 703 aa17.33■□□□□ 0.37
Rnf144a-201ENSMUST00000020971 Dhx9O70133 1380 aaKnown RBP17.33■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 GsdmaQ9EST1 446 aa17.33■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Ralbp1Q62172 648 aa17.33■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Spag9Q58A65 1321 aaKnown RBP17.33■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Rfx1P48377 963 aa17.33■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Ccdc146E9Q9F7 977 aa17.32■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Pcmtd1P59913 357 aa17.32■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Top2bQ64511 1612 aa17.32■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Mroh2bQ7M6Y6 1581 aa17.32■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Ylpm1Q9R0I7 1386 aaKnown RBP17.31■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Kif16bB1AVY7 1312 aa17.31■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 MccE9PWI3 1003 aa17.31■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Map3k1P53349 1493 aa17.3■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Trim58Q5NCC9 485 aa17.3■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Ttll5Q8CHB8 1328 aa17.3■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Rtn4Q99P72 1162 aaKnown RBP17.29■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Ccdc183A2AJB1 534 aa17.28■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Rtf1A2AQ19 715 aaKnown RBP17.28■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Stard8Q8K031 1019 aa17.28■□□□□ 0.36
Rnf144a-201ENSMUST00000020971 Tnnt1O88346 262 aa17.27■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Plekhg5Q66T02 1073 aa17.27■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Rrp12Q6P5B0 1295 aaKnown RBP17.27■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Duox2A2AQ99 1517 aa17.26■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Grin2bQ01097 1482 aa17.25■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 AqrQ8CFQ3 1481 aaKnown RBP17.25■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Ppp2r1aQ76MZ3 589 aa17.24■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 G3bp1P97855 465 aaKnown RBP17.24■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Q3TQI7 289 aaKnown RBP17.24■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Rsph3aQ3UFY4 516 aa17.23■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Pes1Q9EQ61 584 aaKnown RBP17.23■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Utp14aQ640M1 767 aaKnown RBP17.23■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 PtmsQ9D0J8 101 aaKnown RBP17.23■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Jph4Q80WT0 628 aa17.22■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Plekhh1Q80TI1 1356 aa17.21■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 CenpjQ569L8 1344 aa17.21■□□□□ 0.35
Rnf144a-201ENSMUST00000020971 Naip2Q9QUK4 1447 aa17.21■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Rabep1O35551 862 aa17.2■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Gm7298A0A0N4SVU1 1476 aa17.2■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 CgnP59242 1191 aa17.19■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Pde4cQ3UEI1 686 aa17.19■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Nutm1Q8BHP2 1126 aa17.19■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 4933402E13RikQ9D4D2 429 aa17.18■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Nectin2P32507 530 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Cc2d1aQ8K1A6 943 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Myom3A2ABU4 1439 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Mink1Q9JM52 1308 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Ddrgk1Q80WW9 315 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 MsnP26041 577 aaKnown RBP17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Zfp777B9EKF4 885 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Sox12Q04890 314 aa17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Eif4g2Q62448 906 aaKnown RBP17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Tnpo1Q8BFY9 898 aaKnown RBP17.17■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Sh3bp5Q9Z131 463 aa17.16■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 TchhA0A0B4J1F9 1599 aa17.16■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Polr1aO35134 1717 aaKnown RBP17.16■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Apaf1O88879 1249 aa17.15■□□□□ 0.34
Rnf144a-201ENSMUST00000020971 Rassf8Q8CJ96 419 aa17.14■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Tnnt2P50752 301 aa17.14■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 A2mQ6GQT1 1474 aa17.14■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Liat1Q810M6 228 aa17.13■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 VgfQ0VGU4 617 aa17.13■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 PogzQ8BZH4 1409 aaKnown RBP17.13■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Atl3Q91YH5 541 aa17.13■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Naip5Q9R016 1403 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Txndc2Q6P902 515 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Adam1bQ8R534 806 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Gpatch11Q3UFS4 262 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Shq1Q7TMX5 569 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Rab3gap2Q8BMG7 1366 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 BicraF8VPZ9 1578 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Pcf11G3X9Z4 1553 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Cd109Q8R422 1442 aa17.12■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Brpf1B2RRD7 1212 aa17.11■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Triml2E9PW10 424 aa17.11■□□□□ 0.33
Rnf144a-201ENSMUST00000020971 Casq1O09165 405 aa17.11■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms