RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Pkd2O35245 966 aa22.37■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Cwc15Q9JHS9 229 aaKnown RBP22.37■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Gprasp1Q5U4C1 1347 aa22.37■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Anp32eP97822 260 aaKnown RBP22.36■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Gpatch11Q3UFS4 262 aa22.36■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Ralbp1Q62172 648 aa22.36■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Map4P27546 1125 aaKnown RBP22.36■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Cplx2P84086 134 aa22.36■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 CrebrfQ8CDG5 640 aaKnown RBP22.36■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Brpf1B2RRD7 1212 aa22.35■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Isy1Q69ZQ2 285 aaKnown RBP22.35■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Slc4a3P16283 1227 aa22.35■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Kif3cO35066 796 aa22.35■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Gtf3c3Q3TMP1 882 aa22.34■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Sh3bgrQ9WUZ7 214 aa22.34■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Odf2A3KGV1 830 aaKnown RBP22.34■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Chmp4cQ9D7F7 232 aa22.34■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Cnga1P29974 684 aa22.33■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Gcom1E9PZ54 550 aa22.33■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 MyzapQ3UIJ9 466 aa22.33■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Kri1Q8VDQ9 704 aaKnown RBP22.33■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Znhit6Q3UFB2 460 aaKnown RBP22.33■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Gabpb2P81069 414 aa22.33■■□□□ 1.17
Sptbn4-201ENSMUST00000011895 Rufy1Q8BIJ7 712 aa22.33■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Dctn1O08788 1281 aa22.32■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 SlkO54988 1233 aa22.32■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 EzrP26040 586 aaKnown RBP22.31■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Casq1O09165 405 aa22.31■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 MyclP10166 368 aa22.3■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Ccdc173A0JLY1 547 aa22.3■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Ppm1eQ80TL0 749 aa22.3■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Ifit1bl1D3Z6F0 470 aa22.29■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Dhx8A2A4P0 1244 aaKnown RBP22.29■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 GorabQ8BRM2 368 aa22.29■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 UacaQ8CGB3 1411 aa22.29■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Pknox2Q8BG99 474 aa22.29■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Hspa5P20029 655 aaKnown RBP22.28■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 KinQ8K339 391 aa22.27■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Chmp3Q9CQ10 224 aa22.27■■□□□ 1.16
Sptbn4-201ENSMUST00000011895 Exoc6Q8R313 802 aa22.27■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 SafbD3YXK2 937 aaKnown RBP22.26■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Vps53Q8CCB4 832 aa22.26■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Gripap1Q8VD04 806 aa22.26■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Smc4Q8CG47 1286 aa22.25■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Cux1P53564 1515 aa22.25■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Kif4P33174 1231 aa22.25■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 NaspQ99MD9 773 aaKnown RBP22.25■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Ksr2Q3UVC0 959 aa22.25■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Rnf20Q5DTM8 973 aa22.24■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 PhaxQ9JJT9 385 aaKnown RBP22.24■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Ciz1Q8VEH2 845 aa22.24■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Cep162Q6ZQ06 1403 aa22.23■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Utp3Q9JI13 469 aaKnown RBP22.22■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Kif16bB1AVY7 1312 aa22.22■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 CenpjQ569L8 1344 aa22.22■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Krt82Q99M74 516 aa22.22■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Smg6P61406 1418 aaKnown RBP22.21■■□□□ 1.15
Sptbn4-201ENSMUST00000011895 Srcin1Q9QWI6 1250 aa22.2■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Cluap1Q8R3P7 413 aa22.19■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Dcaf11Q91VU6 549 aa22.19■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Necab1Q8BG18 352 aa22.18■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Rock1P70335 1354 aa22.18■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 HmmrQ00547 794 aaKnown RBP22.17■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Gpatch3Q8BIY1 525 aa22.17■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Mphosph9A6H5Y1 991 aa22.16■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Kdm5dQ62240 1548 aa22.16■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Pdcl3Q8BVF2 240 aa22.16■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Tnnt1O88346 262 aa22.15■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Psme1P97371 249 aa22.14■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Cttnbp2B9EJA2 1648 aa22.14■■□□□ 1.14
Sptbn4-201ENSMUST00000011895 Cchcr1Q8K2I2 770 aa22.14■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Nup155Q99P88 1391 aaKnown RBP22.13■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Cplx1P63040 134 aa22.13■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Birc3O08863 600 aa22.13■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 UvssaQ9D479 717 aa22.13■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Rec8Q8C5S7 591 aa22.12■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Lemd3Q9WU40 921 aa22.12■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Mns1Q61884 491 aa22.11■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Ccdc43Q9CR29 222 aaKnown RBP22.11■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Lrrcc1Q69ZB0 1026 aa22.11■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Trak1Q6PD31 939 aa22.11■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Ubxn4Q8VCH8 506 aa22.1■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Wdr78E9PYY5 807 aa22.1■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Rabep1O35551 862 aa22.1■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Atl3Q91YH5 541 aa22.09■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Znf330Q922H9 316 aa22.08■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Tceal9Q9DD24 104 aa22.08■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Ap3b2Q9JME5 1082 aa22.08■■□□□ 1.13
Sptbn4-201ENSMUST00000011895 Pds5bQ4VA53 1446 aaKnown RBP22.07■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Hoxa7P02830 229 aa22.07■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Stk26Q99JT2 416 aa22.07■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Stk31Q99MW1 1018 aa22.06■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 CrbnQ8C7D2 445 aa22.05■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Pnmal2G3X9N3 661 aa22.05■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Tomm22Q9CPQ3 142 aa22.05■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Plin1Q8CGN5 517 aa22.04■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Bicd2Q921C5 820 aa22.04■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Slc4a10Q5DTL9 1118 aa22.04■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Rpap1Q80TE0 1409 aa22.04■■□□□ 1.12
Sptbn4-201ENSMUST00000011895 Gps2Q921N8 327 aa22.03■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms