RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Ccdc27Q3V036 639 aa12.03□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Srek1Q8BZX4 494 aaKnown RBP12.03□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Ipo7Q9EPL8 1038 aaKnown RBP12.03□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Sirt1Q923E4 737 aa12.02□□□□□ -0.48
Sptbn1-202ENSMUST00000011877 Atf3Q60765 181 aa12.02□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Fyb1O35601 819 aa12.02□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Rock2P70336 1388 aa12.02□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Ncbp3Q8BZR9 615 aaKnown RBP12.02□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Cluap1Q8R3P7 413 aa12.01□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 March6Q6ZQ89 909 aa12.01□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Dhx57Q6P5D3 1388 aaKnown RBP12.01□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Pkd2O35245 966 aa12□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Zpr1Q62384 459 aa12□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Becn1O88597 448 aa12□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Stard8Q8K031 1019 aa12□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Pabpn1Q8CCS6 302 aaKnown RBP12□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Golga3P55937 1487 aa12□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 CrcpO35427 148 aa11.99□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Gabpb2P81069 414 aa11.99□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Mfap1aC0HKD8 439 aaKnown RBP11.98□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Mfap1bC0HKD9 439 aaKnown RBP11.98□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 AcrbpQ3V140 540 aa11.98□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Lrrcc1Q69ZB0 1026 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Trak1Q6PD31 939 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Cspp1B2RX88 1205 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Cetn4Q8K4K1 168 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Dnttip2Q8R2M2 758 aaKnown RBP11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Arid4aF8VPQ2 1261 aaKnown RBP11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Ksr2Q3UVC0 959 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Kiaa0754Q69ZZ9 979 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 EspnQ9ET47 871 aa11.97□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Chmp5Q9D7S9 219 aa11.96□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Cgnl1Q6AW69 1298 aa11.96□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Rbm5Q91YE7 815 aaKnown RBP11.96□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 GorabQ8BRM2 368 aa11.96□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Srcin1Q9QWI6 1250 aa11.96□□□□□ -0.49
Sptbn1-202ENSMUST00000011877 Klf15Q9EPW2 415 aa11.96□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Gm21190A0A0G2JGJ6 266 aa11.95□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 NexnQ7TPW1 607 aa11.95□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Hook1Q8BIL5 728 aa11.94□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 ArsiQ32KI9 573 aa11.94□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Zscan21Q07231 555 aa11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Nap1l3Q794H2 544 aa11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Nup155Q99P88 1391 aaKnown RBP11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 MycnP03966 462 aaKnown RBP11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Cplx1P63040 134 aa11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Gnl3lQ6PGG6 577 aaKnown RBP11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Tceal9Q9DD24 104 aa11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Fan1Q69ZT1 1020 aa11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Sf3a1Q8K4Z5 791 aaKnown RBP11.93□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Gsdma3Q5Y4Y6 464 aa11.92□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Pds5bQ4VA53 1446 aaKnown RBP11.92□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Znf710Q3U288 666 aa11.92□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Fam193aQ8CGI1 1231 aaKnown RBP11.92□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Shq1Q7TMX5 569 aa11.92□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Rec8Q8C5S7 591 aa11.91□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Eif2s2Q99L45 331 aaKnown RBP11.91□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Ccdc146E9Q9F7 977 aa11.91□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Ipo8Q7TMY7 1010 aa11.91□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 BcanQ61361 883 aa11.9□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Tsen2Q6P7W5 460 aa11.9□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 PhaxQ9JJT9 385 aaKnown RBP11.9□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Dnai1Q8C0M8 701 aa11.9□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Gpatch11Q3UFS4 262 aa11.9□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Aebp1Q640N1 1128 aa11.9□□□□□ -0.5
Sptbn1-202ENSMUST00000011877 Ripply1Q2WG77 201 aa11.9□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Trim30aP15533 496 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Hdgfl1Q2VPR5 283 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Necab1Q8BG18 352 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Trim29Q8R2Q0 587 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Hap1O35668 628 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Sytl4Q9R0Q1 673 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Q8C5K5 320 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Sugp2Q8CH09 1067 aa11.89□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Sycp1Q62209 993 aa11.88□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Commd10Q8JZY2 202 aa11.88□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Hspa5P20029 655 aaKnown RBP11.88□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 St18Q80TY4 1045 aa11.88□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Rnf20Q5DTM8 973 aa11.88□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Neurod6P48986 337 aa11.87□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Supt16hQ920B9 1047 aa11.87□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Drc7Q6V3W6 876 aa11.87□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Sh3bgrQ9WUZ7 214 aa11.87□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Nap1l2P51860 460 aa11.87□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Smg7Q5RJH6 1138 aaKnown RBP11.87□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Ccdc96Q9CR92 584 aa11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Cabp1Q9JLK7 227 aa11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Zrsr2Q62377 462 aaKnown RBP11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Filip1lQ6P6L0 1131 aa11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 IkQ9Z1M8 557 aaKnown RBP11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Fyco1Q8VDC1 1437 aa11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Ccdc34Q3UI66 367 aa11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Tcerg1Q8CGF7 1100 aaKnown RBP11.86□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 HmmrQ00547 794 aaKnown RBP11.85□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Mphosph9A6H5Y1 991 aa11.85□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Ddx54Q8K4L0 874 aaKnown RBP11.84□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Sart1Q9Z315 806 aaKnown RBP11.84□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Cyb5rlB1AS42 316 aa11.84□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 Wdr78E9PYY5 807 aa11.84□□□□□ -0.51
Sptbn1-202ENSMUST00000011877 WrnO09053 1401 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms