RNA–Protein interactions for RNA: ENSMUST00000004097.15

Cux1-201, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Cux1, Length 12,862 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-201ENSMUST00000004097 Gm21190A0A0G2JGJ6 266 aa10.23□□□□□ -0.77
Cux1-201ENSMUST00000004097 Utp14aQ640M1 767 aaKnown RBP10.23□□□□□ -0.77
Cux1-201ENSMUST00000004097 CrcpO35427 148 aa10.22□□□□□ -0.77
Cux1-201ENSMUST00000004097 GorabQ8BRM2 368 aa10.22□□□□□ -0.77
Cux1-201ENSMUST00000004097 Neurod6P48986 337 aa10.22□□□□□ -0.77
Cux1-201ENSMUST00000004097 Dcaf11Q91VU6 549 aa10.22□□□□□ -0.77
Cux1-201ENSMUST00000004097 Gpatch11Q3UFS4 262 aa10.21□□□□□ -0.77
Cux1-201ENSMUST00000004097 Slc4a3P16283 1227 aa10.21□□□□□ -0.77
Cux1-201ENSMUST00000004097 Speer4f1Q9D5Q6 258 aa10.21□□□□□ -0.77
Cux1-201ENSMUST00000004097 Tpm3P21107 285 aaKnown RBP10.21□□□□□ -0.78
Cux1-201ENSMUST00000004097 Ell2Q3UKU1 639 aa10.2□□□□□ -0.78
Cux1-201ENSMUST00000004097 Bcl2l13P59017 434 aa10.2□□□□□ -0.78
Cux1-201ENSMUST00000004097 FosbP13346 338 aa10.2□□□□□ -0.78
Cux1-201ENSMUST00000004097 Tpm2P58774 284 aa10.2□□□□□ -0.78
Cux1-201ENSMUST00000004097 R3hcc1Q8BSI6 488 aa10.19□□□□□ -0.78
Cux1-201ENSMUST00000004097 IbspQ61711 324 aa10.19□□□□□ -0.78
Cux1-201ENSMUST00000004097 Pabpn1Q8CCS6 302 aaKnown RBP10.19□□□□□ -0.78
Cux1-201ENSMUST00000004097 Smc4Q8CG47 1286 aa10.19□□□□□ -0.78
Cux1-201ENSMUST00000004097 Kdm4aQ8BW72 1064 aa10.19□□□□□ -0.78
Cux1-201ENSMUST00000004097 Samd1D3YXK1 519 aa10.19□□□□□ -0.78
Cux1-201ENSMUST00000004097 Rsf1E9PWW9 1441 aaKnown RBP10.18□□□□□ -0.78
Cux1-201ENSMUST00000004097 Ppp4r3bQ922R5 820 aa10.18□□□□□ -0.78
Cux1-201ENSMUST00000004097 Pde3bQ61409 1100 aa10.18□□□□□ -0.78
Cux1-201ENSMUST00000004097 Sycp1Q62209 993 aa10.18□□□□□ -0.78
Cux1-201ENSMUST00000004097 Drc7Q6V3W6 876 aa10.18□□□□□ -0.78
Cux1-201ENSMUST00000004097 Htatsf1Q8BGC0 757 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 A0A0U1RNP2 1173 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Smg7Q5RJH6 1138 aaKnown RBP10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Themis2Q91YX0 663 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 TprnA2AI08 749 aaKnown RBP10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Znf219Q6IQX8 726 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Commd10Q8JZY2 202 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Frat2Q8K025 231 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Nap1l2P51860 460 aa10.17□□□□□ -0.78
Cux1-201ENSMUST00000004097 Rpap1Q80TE0 1409 aa10.16□□□□□ -0.78
Cux1-201ENSMUST00000004097 SetQ9EQU5 289 aaKnown RBP10.16□□□□□ -0.78
Cux1-201ENSMUST00000004097 Utp3Q9JI13 469 aaKnown RBP10.16□□□□□ -0.78
Cux1-201ENSMUST00000004097 AU015836B2RUM3 263 aa10.16□□□□□ -0.78
Cux1-201ENSMUST00000004097 Shroom4Q1W617 1475 aa10.15□□□□□ -0.78
Cux1-201ENSMUST00000004097 Fhad1A6PWD2 1420 aa10.15□□□□□ -0.78
Cux1-201ENSMUST00000004097 Cald1E9QA15 768 aaKnown RBP10.15□□□□□ -0.78
Cux1-201ENSMUST00000004097 Gabpb2P81069 414 aa10.15□□□□□ -0.78
Cux1-201ENSMUST00000004097 Znf710Q3U288 666 aa10.15□□□□□ -0.78
Cux1-201ENSMUST00000004097 Cep89Q9CZX2 791 aa10.15□□□□□ -0.79
Cux1-201ENSMUST00000004097 Bicdl1A0JNT9 577 aa10.14□□□□□ -0.79
Cux1-201ENSMUST00000004097 Calcoco2A2A6M5 331 aa10.14□□□□□ -0.79
Cux1-201ENSMUST00000004097 Fan1Q69ZT1 1020 aa10.14□□□□□ -0.79
Cux1-201ENSMUST00000004097 Nap1l1P28656 391 aaKnown RBP10.14□□□□□ -0.79
Cux1-201ENSMUST00000004097 Chmp4cQ9D7F7 232 aa10.13□□□□□ -0.79
Cux1-201ENSMUST00000004097 Kdm2bQ6P1G2 1309 aa10.13□□□□□ -0.79
Cux1-201ENSMUST00000004097 UvssaQ9D479 717 aa10.12□□□□□ -0.79
Cux1-201ENSMUST00000004097 Mfap1aC0HKD8 439 aaKnown RBP10.12□□□□□ -0.79
Cux1-201ENSMUST00000004097 Mfap1bC0HKD9 439 aaKnown RBP10.12□□□□□ -0.79
Cux1-201ENSMUST00000004097 Psmd1Q3TXS7 953 aa10.12□□□□□ -0.79
Cux1-201ENSMUST00000004097 Rad54l2Q99NG0 1466 aa10.12□□□□□ -0.79
Cux1-201ENSMUST00000004097 Shq1Q7TMX5 569 aa10.12□□□□□ -0.79
Cux1-201ENSMUST00000004097 Ksr2Q3UVC0 959 aa10.11□□□□□ -0.79
Cux1-201ENSMUST00000004097 Rundc1Q0VDN7 615 aa10.11□□□□□ -0.79
Cux1-201ENSMUST00000004097 Rwdd1Q9CQK7 243 aa10.11□□□□□ -0.79
Cux1-201ENSMUST00000004097 Zcwpw1Q6IR42 630 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Golga2Q921M4 999 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Gtf2f1Q3THK3 508 aaKnown RBP10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Tmf1B9EKI3 1091 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Rnf216P58283 853 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Rb1cc1Q9ESK9 1588 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Zranb3Q6NZP1 1069 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Stk31Q99MW1 1018 aa10.1□□□□□ -0.79
Cux1-201ENSMUST00000004097 Mink1Q9JM52 1308 aa10.09□□□□□ -0.79
Cux1-201ENSMUST00000004097 Gm10471E9Q1C7 252 aa10.09□□□□□ -0.79
Cux1-201ENSMUST00000004097 Trak1Q6PD31 939 aa10.09□□□□□ -0.79
Cux1-201ENSMUST00000004097 Cwc22Q8C5N3 908 aaKnown RBP10.08□□□□□ -0.8
Cux1-201ENSMUST00000004097 Tceal9Q9DD24 104 aa10.08□□□□□ -0.8
Cux1-201ENSMUST00000004097 CrbnQ8C7D2 445 aa10.08□□□□□ -0.8
Cux1-201ENSMUST00000004097 Cplx1P63040 134 aa10.08□□□□□ -0.8
Cux1-201ENSMUST00000004097 Ccdc146E9Q9F7 977 aa10.07□□□□□ -0.8
Cux1-201ENSMUST00000004097 Kcnj4P52189 445 aa10.07□□□□□ -0.8
Cux1-201ENSMUST00000004097 Mapk8ip1Q9WVI9 707 aa10.07□□□□□ -0.8
Cux1-201ENSMUST00000004097 Tmc1Q8R4P5 757 aa10.07□□□□□ -0.8
Cux1-201ENSMUST00000004097 Q8C5K5 320 aa10.07□□□□□ -0.8
Cux1-201ENSMUST00000004097 Kiaa1211Q5PR69 1207 aa10.07□□□□□ -0.8
Cux1-201ENSMUST00000004097 Wdhd1P59328 1117 aa10.06□□□□□ -0.8
Cux1-201ENSMUST00000004097 Slc5a4bQ91ZP4 660 aa10.06□□□□□ -0.8
Cux1-201ENSMUST00000004097 Podxl2Q8CAE9 603 aa10.06□□□□□ -0.8
Cux1-201ENSMUST00000004097 Tpm1P58771 284 aa10.06□□□□□ -0.8
Cux1-201ENSMUST00000004097 Cetn4Q8K4K1 168 aa10.06□□□□□ -0.8
Cux1-201ENSMUST00000004097 Smarce1O54941 411 aaKnown RBP10.05□□□□□ -0.8
Cux1-201ENSMUST00000004097 Polr3gQ6NXY9 223 aa10.05□□□□□ -0.8
Cux1-201ENSMUST00000004097 Acsbg1Q99PU5 721 aa10.05□□□□□ -0.8
Cux1-201ENSMUST00000004097 Rsph6aQ8CDR2 708 aa10.04□□□□□ -0.8
Cux1-201ENSMUST00000004097 Kif27Q7M6Z4 1394 aa10.04□□□□□ -0.8
Cux1-201ENSMUST00000004097 Ppp1r1bQ60829 194 aa10.03□□□□□ -0.8
Cux1-201ENSMUST00000004097 Ccdc9Q8VC31 543 aaKnown RBP10.03□□□□□ -0.8
Cux1-201ENSMUST00000004097 Cplx2P84086 134 aa10.03□□□□□ -0.8
Cux1-201ENSMUST00000004097 Washc4Q3UMB9 1173 aa10.03□□□□□ -0.8
Cux1-201ENSMUST00000004097 Kiaa0754Q69ZZ9 979 aa10.03□□□□□ -0.8
Cux1-201ENSMUST00000004097 NexnQ7TPW1 607 aa10.03□□□□□ -0.8
Cux1-201ENSMUST00000004097 Pdcl3Q8BVF2 240 aa10.02□□□□□ -0.8
Cux1-201ENSMUST00000004097 Pus7B7ZNL8 666 aaKnown RBP10.02□□□□□ -0.8
Cux1-201ENSMUST00000004097 Gtpbp6Q3U6U5 514 aa10.02□□□□□ -0.8
Cux1-201ENSMUST00000004097 Sel1lQ9Z2G6 790 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 150.2 ms