RNA–Protein interactions for RNA: tF(GAA)M

tF(GAA)M, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)M, Length 73 nt, Biotype tRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)MtF(GAA)M VPS55P47111 140 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M TAH11P47112 604 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M HAM1P47119 197 aaKnown RBP0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M YJR098CP47139 656 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M GET1P53192 235 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M RCF2P53721 224 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M MET14Q02196 202 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M PET117Q02771 107 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M PET191Q02772 108 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M NCE101Q02820 53 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M RVB1Q03940 463 aaKnown RBP0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M YHP1Q04116 353 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M VBA4Q04602 768 aaKnown RBP0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M COG8Q04632 607 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M SMA2Q04658 369 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M YLR283WQ05867 314 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M ECI1Q05871 280 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M ASR1Q06834 288 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M YPL216WQ08964 1102 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M TSC13Q99190 310 aa0.51□□□□□ -2.33
tF(GAA)MtF(GAA)M YAL064W-BO13512 126 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TRP3P00937 484 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-LR1P0C2J4 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-FP0CX61 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-GR2P0CX62 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M AMS1P22855 1083 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M SCO1P23833 295 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M SLM5P25345 492 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M SUR1P33300 382 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M LOS1P33418 1100 aaPredicted RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M PRX1P34227 261 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M PTC1P35182 281 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M PBP2P38151 413 aaKnown RBP RIP-Chip data0.5□□□□□ -2.33not detected
tF(GAA)MtF(GAA)M ECM33P38248 429 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M MSG5P38590 489 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M NSG1P38837 291 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M HXT6P39003 570 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M SMB1P40018 196 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M MEP1P40260 492 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M SIM1P40472 476 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M BMT5P40493 336 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M CAB2P40506 365 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M CDC40P40968 455 aaPredicted RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M UPF3P48412 387 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M LYS20P48570 428 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TAF6P53040 516 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M YGR126WP53274 230 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M RNH70P53331 553 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M YNL260CP53846 198 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M COX12Q01519 83 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-DR2Q03483 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M SHE9Q04172 456 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M CAC2Q04199 468 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M FAL1Q12099 399 aaKnown RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M DCS2Q12123 353 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-BQ12260 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M RRP42Q12277 265 aaPredicted RBP0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-OR2Q12293 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M ZRT2Q12436 422 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M TY2A-OR1Q12439 438 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M RTN2Q12443 393 aa0.5□□□□□ -2.33
tF(GAA)MtF(GAA)M BI2P03873 423 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M STE7P06784 515 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M SEC12P11655 471 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M BAR1P12630 587 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M CBS2P14905 389 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M AAC3P18238 307 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M ART10P18634 518 aaKnown RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M MCK1P21965 375 aaKnown RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M PHO3P24031 467 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M PUP1P25043 261 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M RNA15P25299 296 aaPredicted RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M YCR099CP25657 155 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M MGT1P26188 188 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M GAR1P28007 205 aaKnown RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M PDB1P32473 366 aaKnown RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M VPS17P32913 551 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M SLC1P33333 303 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M YKL100CP34248 587 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M MAE1P36013 669 aaKnown RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M PRS4P38063 326 aaPredicted RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M REV7P38927 245 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M HOS4P40480 1083 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M RLP7P40693 322 aaKnown RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M GAB1P41733 394 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M MEP2P41948 499 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M YGR210CP42942 411 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M PRM10P42946 383 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M AGP3P43548 558 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M ATG18P43601 500 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M YFR054CP43622 192 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M TRS85P46944 698 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M MAD3P47074 515 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M NIT3P49954 291 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M AIF1P52923 378 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M YGR045CP53229 120 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M YGR111WP53265 400 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M NOP15P53927 220 aaPredicted RBP0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M ASI3P53983 676 aa0.49□□□□□ -2.33
tF(GAA)MtF(GAA)M RIM13Q03792 727 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms