RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C RTK1Q12100 620 aaPredicted RBP3.15□□□□□ -1.9
RPA135YPR010C YDR262WQ12331 272 aa3.15□□□□□ -1.9
RPA135YPR010C YPR071WQ12346 211 aa3.15□□□□□ -1.9
RPA135YPR010C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
RPA135YPR010C MRP13P12686 339 aa3.15□□□□□ -1.91
RPA135YPR010C DBP2P24783 546 aaKnown RBP3.15□□□□□ -1.91
RPA135YPR010C HOG1P32485 435 aa3.15□□□□□ -1.91
RPA135YPR010C UTP11P34247 250 aaPredicted RBP3.15□□□□□ -1.91
RPA135YPR010C SPT23P35210 1082 aa3.15□□□□□ -1.91
RPA135YPR010C FRE2P36033 711 aa3.15□□□□□ -1.91
RPA135YPR010C SDS22P36047 338 aa3.15□□□□□ -1.91
RPA135YPR010C MCM7P38132 845 aa3.15□□□□□ -1.91
RPA135YPR010C KRE29P40026 464 aa3.15□□□□□ -1.91
RPA135YPR010C JLP2P40206 208 aa3.15□□□□□ -1.91
RPA135YPR010C HMS2P47175 358 aa3.15□□□□□ -1.91
RPA135YPR010C DAM1P53267 343 aa3.15□□□□□ -1.91
RPA135YPR010C BUD17P53727 317 aa3.15□□□□□ -1.91
RPA135YPR010C EMG1Q06287 252 aaKnown RBP3.15□□□□□ -1.91
RPA135YPR010C FMP45Q07651 309 aa3.15□□□□□ -1.91
RPA135YPR010C PRP46Q12417 451 aaPredicted RBP3.15□□□□□ -1.91
RPA135YPR010C FAS1P07149 2051 aaKnown RBP3.15□□□□□ -1.91
RPA135YPR010C RPS18AP0CX55 146 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C RPS18BP0CX56 146 aaPredicted RBP3.14□□□□□ -1.91
RPA135YPR010C PHO91P27514 894 aa3.14□□□□□ -1.91
RPA135YPR010C NAM9P27929 486 aa3.14□□□□□ -1.91
RPA135YPR010C STP2P38704 541 aa3.14□□□□□ -1.91
RPA135YPR010C ASI3P53983 676 aa3.14□□□□□ -1.91
RPA135YPR010C VBA4Q04602 768 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C FMP40Q08968 688 aaPredicted RBP3.14□□□□□ -1.91
RPA135YPR010C HER1Q12276 1246 aa3.14□□□□□ -1.91
RPA135YPR010C PSF1Q12488 208 aa3.14□□□□□ -1.91
RPA135YPR010C YLR099W-AQ3E798 87 aa3.14□□□□□ -1.91
RPA135YPR010C TPK3P05986 398 aa3.14□□□□□ -1.91
RPA135YPR010C GAL3P13045 520 aa3.14□□□□□ -1.91
RPA135YPR010C ADE1P27616 306 aa3.14□□□□□ -1.91
RPA135YPR010C YBL010CP32788 280 aa3.14□□□□□ -1.91
RPA135YPR010C ASC1P38011 319 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C TSL1P38427 1098 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C IPI1P38803 334 aaPredicted RBP3.14□□□□□ -1.91
RPA135YPR010C FMO1P38866 432 aa3.14□□□□□ -1.91
RPA135YPR010C ELO1P39540 310 aa3.14□□□□□ -1.91
RPA135YPR010C AIM10P39965 576 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C CWC23P52868 283 aaPredicted RBP3.14□□□□□ -1.91
RPA135YPR010C SWP1Q02795 286 aa3.14□□□□□ -1.91
RPA135YPR010C NGL2Q03264 515 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C PLB3Q08108 686 aa3.14□□□□□ -1.91
RPA135YPR010C MCA1Q08601 432 aa3.14□□□□□ -1.91
RPA135YPR010C SPC3Q12133 184 aa3.14□□□□□ -1.91
RPA135YPR010C SFM1Q12314 213 aa3.14□□□□□ -1.91
RPA135YPR010C NPC2Q12408 173 aa3.14□□□□□ -1.91
RPA135YPR010C RPL6BP05739 176 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C PDE2P06776 526 aa3.14□□□□□ -1.91
RPA135YPR010C GCN3P14741 305 aa3.14□□□□□ -1.91
RPA135YPR010C APA2P22108 325 aa3.14□□□□□ -1.91
RPA135YPR010C RPC34P32910 317 aa3.14□□□□□ -1.91
RPA135YPR010C MRPL16P38064 232 aa3.14□□□□□ -1.91
RPA135YPR010C YRO2P38079 344 aa3.14□□□□□ -1.91
RPA135YPR010C YHR097CP38809 366 aaKnown RBP3.14□□□□□ -1.91
RPA135YPR010C SMK1P41808 388 aa3.14□□□□□ -1.91
RPA135YPR010C SER2P42941 309 aa3.14□□□□□ -1.91
RPA135YPR010C SFH5P47008 294 aa3.14□□□□□ -1.91
RPA135YPR010C YJL043WP47053 257 aa3.14□□□□□ -1.91
RPA135YPR010C YJR141WP47172 347 aaPredicted RBP3.14□□□□□ -1.91
RPA135YPR010C YPR1Q12458 312 aa3.14□□□□□ -1.91
RPA135YPR010C SUS1Q6WNK7 96 aa3.14□□□□□ -1.91
RPA135YPR010C LAG2Q92325 660 aa3.14□□□□□ -1.91
RPA135YPR010C IRA2P19158 3079 aa3.14□□□□□ -1.91
RPA135YPR010C ADE5,7P07244 802 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C GRX2P17695 143 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C SNF6P18888 332 aa3.13□□□□□ -1.91
RPA135YPR010C YIM1P28625 365 aa3.13□□□□□ -1.91
RPA135YPR010C FUN26P31381 517 aa3.13□□□□□ -1.91
RPA135YPR010C HMX1P32339 317 aa3.13□□□□□ -1.91
RPA135YPR010C MSN4P33749 630 aa3.13□□□□□ -1.91
RPA135YPR010C OAR1P35731 278 aa3.13□□□□□ -1.91
RPA135YPR010C KKQ8P36004 724 aa3.13□□□□□ -1.91
RPA135YPR010C ECM8P38246 354 aa3.13□□□□□ -1.91
RPA135YPR010C ARN2P38724 620 aa3.13□□□□□ -1.91
RPA135YPR010C FET3P38993 636 aa3.13□□□□□ -1.91
RPA135YPR010C JHD2P47156 728 aaPredicted RBP3.13□□□□□ -1.91
RPA135YPR010C ASK10P48361 1146 aa3.13□□□□□ -1.91
RPA135YPR010C FHN1P53279 174 aa3.13□□□□□ -1.91
RPA135YPR010C MRPL13Q02204 264 aa3.13□□□□□ -1.91
RPA135YPR010C YVH1Q02256 364 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C EGD1Q02642 157 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C TRM82Q03774 444 aa3.13□□□□□ -1.91
RPA135YPR010C SAM4Q08985 325 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C RKM5Q12367 367 aa3.13□□□□□ -1.91
RPA135YPR010C DCP1Q12517 231 aaPredicted RBP3.13□□□□□ -1.91
RPA135YPR010C TOR1P35169 2470 aa3.13□□□□□ -1.91
RPA135YPR010C GCD1P09032 578 aaPredicted RBP3.13□□□□□ -1.91
RPA135YPR010C DBF2P22204 572 aa3.13□□□□□ -1.91
RPA135YPR010C RPS1BP23248 255 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C GPI12P23797 304 aa3.13□□□□□ -1.91
RPA135YPR010C NUD1P32336 851 aa3.13□□□□□ -1.91
RPA135YPR010C VMA6P32366 345 aaKnown RBP3.13□□□□□ -1.91
RPA135YPR010C MSN2P33748 704 aa3.13□□□□□ -1.91
RPA135YPR010C YBR241CP38142 488 aa3.13□□□□□ -1.91
RPA135YPR010C HPA3P39979 161 aa3.13□□□□□ -1.91
RPA135YPR010C MPM1P40364 252 aa3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms