RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	SIR4	P11978	1358 aa		3.22	□□□□□ -1.89
FRE4	YNR060W	IPP1	P00817	287 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	MATALPHA2	P0CY08	210 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	HMLALPHA2	P0CY09	210 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	FUS3	P16892	353 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	ADY2	P25613	283 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	BUB3	P26449	341 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	MSK1	P32048	576 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	MSN4	P33749	630 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	CAF4	P36130	643 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	FLO10	P36170	1169 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	ECM31	P38122	312 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	HPM1	P40481	377 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	FMP33	P46998	180 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YHC3	P47040	408 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YJL043W	P47053	257 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	STE24	P47154	453 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YIF1	P53845	314 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	MPS1	P54199	764 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	LGE1	Q02796	332 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	SLD5	Q03406	294 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	SWF1	Q04629	336 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	BNA5	Q05979	453 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YLR173W	Q06247	608 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	ESA1	Q08649	445 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.21	□□□□□ -1.9	not detected
FRE4	YNR060W	ATG34	Q12292	412 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	SNU23	Q12368	194 aa	Predicted RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	OCA6	Q12454	224 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	BUD3	P25558	1636 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	GAL4	P04386	881 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	GCN3	P14741	305 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	SEC1	P30619	724 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	SNC1	P31109	117 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	OAR1	P35731	278 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	FES1	P38260	290 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	IML3	P38265	245 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YER079W	P40052	210 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	YFH7	P43591	353 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YJR056C	P47115	236 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	LIA1	P47120	325 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	NAS6	P50086	228 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YNL134C	P53912	376 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	ATC1	Q04005	294 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YMR034C	Q05131	434 aa	Predicted RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	MHR1	Q06630	226 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	YDL218W	Q07629	317 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	RPN8	Q08723	338 aa	Known RBP	3.21	□□□□□ -1.9
FRE4	YNR060W	PFA4	Q12006	378 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	PNS1	Q12412	539 aa		3.21	□□□□□ -1.9
FRE4	YNR060W	BI2	P03873	423 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	MSF1	P08425	469 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	RPL18A	P0CX49	186 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	RPL18B	P0CX50	186 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	SAR1	P20606	190 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	RPI1	P23250	407 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	REC114	P32841	428 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
FRE4	YNR060W	KKQ8	P36004	724 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	TAE1	P38340	232 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	SSH1	P38353	490 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	PCL6	P40038	420 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	EMC2	P47133	292 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	MRK1	P50873	501 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	RMR1	P53060	241 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	RLI1	Q03195	608 aa	Known RBP	3.2	□□□□□ -1.9
FRE4	YNR060W	SPO77	Q06134	477 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	GIS3	Q12418	502 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	YCL001W-B	Q96VH2	84 aa		3.2	□□□□□ -1.9
FRE4	YNR060W	APA2	P22108	325 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	DAL2	P25335	343 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	YMR134W	P40207	237 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	UTP25	P40498	721 aa	Known RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	YRB2	P40517	327 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	GND2	P53319	492 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	YPL068C	Q02749	293 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	RNY1	Q02933	434 aa	Known RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	MRPS17	Q03246	237 aa	Predicted RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	BNA7	Q04066	261 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	AIM33	Q04516	312 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	BSP1	Q06604	576 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	SMC5	Q08204	1093 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	DDC1	Q08949	612 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	NCA2	Q12374	616 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	ORT1	Q12375	292 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	FSH3	Q99369	266 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	DST1	P07273	309 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	YGL041W-A	P0C5N3	154 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	POL30	P15873	258 aa	Known RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	DPB2	P24482	689 aa	Predicted RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	YCR007C	P25354	239 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	FUN26	P31381	517 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	ARO4	P32449	370 aa	Known RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	APE2	P32454	952 aa	Known RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	HXT1	P32465	570 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	SKN1	P33336	771 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	ECT1	P33412	323 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	RTC2	P38279	296 aa		3.19	□□□□□ -1.9
FRE4	YNR060W	ERG10	P41338	398 aa	Known RBP	3.19	□□□□□ -1.9
FRE4	YNR060W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms