RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	AFG1	P32317	509 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	RIM1	P32445	135 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	HXT3	P32466	567 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	IME2	P32581	645 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	MRPL15	P36523	253 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	ARA1	P38115	344 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	MMS21	P38632	267 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	END3	P39013	349 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	VMA13	P41807	478 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	BRO1	P48582	844 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	NBP35	P52920	328 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	CWC22	P53333	577 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	KAP120	Q02932	1032 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	RRP45	Q05636	305 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	MRPL51	Q06090	140 aa	Predicted RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	PHO92	Q06390	306 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	VAC14	Q06708	880 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	BSC6	Q08280	497 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	HSP42	Q12329	375 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	RKM5	Q12367	367 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	OCA6	Q12454	224 aa		2.75	□□□□□ -1.97
ATG3	YNR007C	RRP12	Q12754	1228 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	BRR2	P32639	2163 aa	Known RBP	2.75	□□□□□ -1.97
ATG3	YNR007C	LEU4	P06208	619 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	RIP1	P08067	215 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	RPL3	P14126	387 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	SPS22	P25380	463 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	YCL068C	P25593	260 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	BUB3	P26449	341 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	IDH2	P28241	369 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	TPS2	P31688	896 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	AGA1	P32323	725 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	TIP20	P33891	701 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	SIP2	P34164	415 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	TUL1	P36096	758 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	NTC20	P38302	140 aa	Predicted RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	HAT2	P39984	401 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	EFM4	P40516	257 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	POP1	P41812	875 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	ELP2	P42935	788 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	CTK3	P46963	296 aa	Predicted RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	CIS3	P47001	227 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	HOC1	P47124	396 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	COS10	P52924	374 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	MPS2	P53159	387 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	OSH6	Q02201	448 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	UTP6	Q02354	440 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	IRC15	Q02733	499 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	YMR114C	Q04471	368 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	BCH1	Q05029	724 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	ERP1	Q05359	219 aa	Known RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	SYO1	Q07395	620 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	SMF3	Q12078	473 aa	Predicted RBP	2.74	□□□□□ -1.97
ATG3	YNR007C	SET6	Q12529	373 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	YIL046W-A	Q3E7Z4	54 aa		2.74	□□□□□ -1.97
ATG3	YNR007C	HEM2	P05373	342 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	MCK1	P21965	375 aa	Known RBP	2.73	□□□□□ -1.97
ATG3	YNR007C	RAD57	P25301	460 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	ATP11	P32453	318 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	SFC1	P33303	322 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	RRP1	P35178	278 aa	Predicted RBP	2.73	□□□□□ -1.97
ATG3	YNR007C	VHC1	P38329	1120 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	LYS1	P38998	373 aa	RIP-Chip data	2.73	□□□□□ -1.97	RIP-Chip
ATG3	YNR007C	FRT2	P39734	528 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	YEL073C	P39974	107 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	SYG1	P40528	902 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	INA22	P40576	216 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	GCD14	P46959	383 aa	Predicted RBP	2.73	□□□□□ -1.97
ATG3	YNR007C	MDM34	P53083	459 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	OGG1	P53397	376 aa	Predicted RBP	2.73	□□□□□ -1.97
ATG3	YNR007C	YNL260C	P53846	198 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	VAC7	P53950	1165 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	SPP2	Q02521	185 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	HPT1	Q04178	221 aa	Known RBP	2.73	□□□□□ -1.97
ATG3	YNR007C	TRM12	Q04235	462 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	YMR087W	Q04299	284 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	YMR027W	Q04371	470 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	SML1	Q04964	104 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	COS7	Q07788	383 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	REX3	Q12090	404 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	ERP4	Q12450	207 aa		2.73	□□□□□ -1.97
ATG3	YNR007C	CDC8	P00572	216 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	MES1	P00958	751 aa	Known RBP	2.72	□□□□□ -1.97
ATG3	YNR007C	TEF1	P02994	458 aa	Known RBP	2.72	□□□□□ -1.97
ATG3	YNR007C	BCY1	P07278	416 aa	Known RBP	2.72	□□□□□ -1.97
ATG3	YNR007C	ATR1	P13090	542 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	ATP10	P18496	279 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	YSR3	P23501	404 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	FUN19	P28003	413 aa	Predicted RBP	2.72	□□□□□ -1.97
ATG3	YNR007C	URA7	P28274	579 aa	Known RBP	2.72	□□□□□ -1.97
ATG3	YNR007C	CRM1	P30822	1084 aa	Known RBP	2.72	□□□□□ -1.97
ATG3	YNR007C	NDC1	P32500	655 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	YME2	P32843	850 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	PTR2	P32901	601 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	SKN1	P33336	771 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	RSM22	P36056	628 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	YBR062C	P38239	180 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	MSG5	P38590	489 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	YHR182W	P38870	785 aa		2.72	□□□□□ -1.97
ATG3	YNR007C	VPS52	P39904	641 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms