RNA–Protein interactions for RNA: YNL178W

RPS3, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS3, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS3	YNL178W	TPO4	Q12256	659 aa		5.7	□□□□□ -1.5
RPS3	YNL178W	GLT1	Q12680	2145 aa	Known RBP	5.7	□□□□□ -1.5
RPS3	YNL178W	DET1	Q99288	334 aa	Known RBP	5.7	□□□□□ -1.5
RPS3	YNL178W	GCN1	P33892	2672 aa	Known RBP	5.7	□□□□□ -1.5
RPS3	YNL178W	ENA1	P13587	1091 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	IDP1	P21954	428 aa	Known RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	LYP1	P32487	611 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	DHR2	P36009	735 aa	Predicted RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	YKL069W	P36088	180 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	MCM7	P38132	845 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	ARN2	P38724	620 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	RIX1	P38883	763 aa	Predicted RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	YTA6	P40328	754 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	BAP3	P41815	604 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	SHR5	P41912	237 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	LEM3	P42838	414 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	SNO3	P43544	222 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	PMT3	P47190	753 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	ASI1	P54074	624 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	ENA2	Q01896	1091 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	SEC13	Q04491	297 aa	Known RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	RNH1	Q04740	348 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	SYO1	Q07395	620 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	NOP12	Q08208	459 aa	Known RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	UIP4	Q08926	304 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	SPC3	Q12133	184 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	NPC2	Q12408	173 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	PAR32	Q12515	295 aa	Known RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	ENA5	Q12691	1091 aa		5.69	□□□□□ -1.5
RPS3	YNL178W	TMA7	Q3E764	64 aa	Known RBP	5.69	□□□□□ -1.5
RPS3	YNL178W	FLP1	P03870	423 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	DAT1	P13483	248 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	DPM1	P14020	267 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	ERD2	P18414	219 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	SNC1	P31109	117 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	MAE1	P36013	669 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	YKL077W	P36081	392 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	YBR184W	P38299	523 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	RPS20	P38701	121 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	NSG1	P38837	291 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	ZRG8	P40021	1076 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	IES5	P40060	125 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	CUP9	P41817	306 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	QRI7	P43122	407 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	IDS2	P46958	469 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	RBL2	P48606	106 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	YGL235W	P53071	178 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	YGL101W	P53144	215 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	LSG1	P53145	640 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	NQM1	P53228	333 aa	Predicted RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	RBG2	P53295	368 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	PEX25	Q02969	394 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	SNZ1	Q03148	297 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	ELP6	Q04868	273 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	PAL1	Q05518	499 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	EMG1	Q06287	252 aa	Known RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	CDA2	Q06703	312 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	GSH2	Q08220	491 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	HER1	Q12276	1246 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	FRE7	Q12333	620 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	PNS1	Q12412	539 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	PRP46	Q12417	451 aa	Predicted RBP	5.68	□□□□□ -1.5
RPS3	YNL178W	YDL007C-A	Q2V2Q0	85 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	YOS9	Q99220	542 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	DFG16	Q99234	619 aa		5.68	□□□□□ -1.5
RPS3	YNL178W	RIP1	P08067	215 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	ARF1	P11076	181 aa	Known RBP	5.67	□□□□□ -1.5
RPS3	YNL178W	MRPL33	P20084	86 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	EMP70	P32802	667 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	MDL1	P33310	695 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	YBR139W	P38109	508 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	RRP4	P38792	359 aa	Known RBP	5.67	□□□□□ -1.5
RPS3	YNL178W	YIL166C	P40445	542 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	CIN1	P40987	1014 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	IRC5	P43610	853 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	SHE4	P51534	789 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	OST6	Q03723	332 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	SNT309	Q06091	175 aa	Predicted RBP	5.67	□□□□□ -1.5
RPS3	YNL178W	YPR127W	Q06494	345 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	NTG2	Q08214	380 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	YOR378W	Q08902	515 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	TMA17	Q12513	150 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	TAD3	Q9URQ3	322 aa		5.67	□□□□□ -1.5
RPS3	YNL178W	YPT1	P01123	206 aa	Known RBP	5.66	□□□□□ -1.5
RPS3	YNL178W	ADE5,7	P07244	802 aa	Known RBP	5.66	□□□□□ -1.5
RPS3	YNL178W	ERD1	P16151	362 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	NCP1	P16603	691 aa	Known RBP	5.66	□□□□□ -1.5
RPS3	YNL178W	PRP28	P23394	588 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	DPB2	P24482	689 aa	Predicted RBP	5.66	□□□□□ -1.5
RPS3	YNL178W	CWH43	P25618	953 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	PUP2	P32379	260 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	TIM12	P32830	109 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	BAP2	P38084	609 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	RTC2	P38279	296 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	MDM31	P38880	579 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	SKN7	P38889	622 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	CHL4	P38907	458 aa		5.66	□□□□□ -1.5
RPS3	YNL178W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
RPS3	YNL178W	GDI1	P39958	451 aa	Known RBP	5.66	□□□□□ -1.5
RPS3	YNL178W	NTA1	P40354	457 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms