RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C BAT1P38891 393 aaKnown RBP3.85□□□□□ -1.79
CUS1YMR240C UTP25P40498 721 aaKnown RBP3.85□□□□□ -1.79
CUS1YMR240C SDT1P53078 280 aa3.85□□□□□ -1.79
CUS1YMR240C LSG1P53145 640 aaKnown RBP3.85□□□□□ -1.79
CUS1YMR240C BUR2Q05949 395 aa3.85□□□□□ -1.79
CUS1YMR240C STE7P06784 515 aa3.84□□□□□ -1.79
CUS1YMR240C LDS1P31379 325 aa3.84□□□□□ -1.79
CUS1YMR240C ACB1P31787 87 aa3.84□□□□□ -1.79
CUS1YMR240C OM14P38325 134 aa3.84□□□□□ -1.79
CUS1YMR240C PXR1P53335 271 aaPredicted RBP3.84□□□□□ -1.79
CUS1YMR240C DBP6P53734 629 aaKnown RBP3.84□□□□□ -1.79
CUS1YMR240C TRM82Q03774 444 aa3.84□□□□□ -1.79
CUS1YMR240C DNL4Q08387 944 aaPredicted RBP3.84□□□□□ -1.79
CUS1YMR240C SLM3Q12093 417 aa3.84□□□□□ -1.79
CUS1YMR240C SAR1P20606 190 aaKnown RBP3.83□□□□□ -1.8
CUS1YMR240C CDC50P25656 391 aa3.83□□□□□ -1.8
CUS1YMR240C DEP1P31385 405 aa3.83□□□□□ -1.8
CUS1YMR240C EBP2P36049 427 aaKnown RBP3.83□□□□□ -1.8
CUS1YMR240C INA22P40576 216 aa3.83□□□□□ -1.8
CUS1YMR240C CDC40P40968 455 aaPredicted RBP3.83□□□□□ -1.8
CUS1YMR240C LOH1P47055 219 aa3.83□□□□□ -1.8
CUS1YMR240C RIB4P50861 169 aaPredicted RBP3.83□□□□□ -1.8
CUS1YMR240C VOA1P53262 265 aa3.83□□□□□ -1.8
CUS1YMR240C YGR168CP53293 376 aa3.83□□□□□ -1.8
CUS1YMR240C FSH2Q05015 223 aa3.83□□□□□ -1.8
CUS1YMR240C ATP16Q12165 160 aa3.83□□□□□ -1.8
CUS1YMR240C FRE8Q12209 686 aa3.83□□□□□ -1.8
CUS1YMR240C PAA1Q12447 191 aaKnown RBP3.83□□□□□ -1.8
CUS1YMR240C YIL002W-AQ3E7Z5 69 aa3.83□□□□□ -1.8
CUS1YMR240C MIR1P23641 311 aaKnown RBP3.82□□□□□ -1.8
CUS1YMR240C RBK1P25332 333 aa3.82□□□□□ -1.8
CUS1YMR240C BUD2P33314 1104 aa3.82□□□□□ -1.8
CUS1YMR240C RCK2P38623 610 aa3.82□□□□□ -1.8
CUS1YMR240C DFG10P40526 253 aa3.82□□□□□ -1.8
CUS1YMR240C YNL320WP42840 284 aa3.82□□□□□ -1.8
CUS1YMR240C VAC7P53950 1165 aa3.82□□□□□ -1.8
CUS1YMR240C PRP38Q00723 242 aaPredicted RBP3.82□□□□□ -1.8
CUS1YMR240C RRG8Q06109 277 aa3.82□□□□□ -1.8
CUS1YMR240C PFK27Q12471 397 aaPredicted RBP3.82□□□□□ -1.8
CUS1YMR240C DCP1Q12517 231 aaPredicted RBP3.82□□□□□ -1.8
CUS1YMR240C ZRC1P20107 442 aa3.81□□□□□ -1.8
CUS1YMR240C TIM17P39515 158 aa3.81□□□□□ -1.8
CUS1YMR240C HEM14P40012 539 aa3.81□□□□□ -1.8
CUS1YMR240C MEP1P40260 492 aa3.81□□□□□ -1.8
CUS1YMR240C PRE5P40302 234 aaKnown RBP3.81□□□□□ -1.8
CUS1YMR240C EGD1Q02642 157 aaKnown RBP3.81□□□□□ -1.8
CUS1YMR240C LIP2Q06005 328 aa3.81□□□□□ -1.8
CUS1YMR240C GAS2Q06135 555 aa3.81□□□□□ -1.8
CUS1YMR240C MHR1Q06630 226 aa3.81□□□□□ -1.8
CUS1YMR240C VAC14Q06708 880 aa3.81□□□□□ -1.8
CUS1YMR240C RPC40P07703 335 aaKnown RBP3.8□□□□□ -1.8
CUS1YMR240C PRB1P09232 635 aa3.8□□□□□ -1.8
CUS1YMR240C PMT2P31382 759 aa3.8□□□□□ -1.8
CUS1YMR240C SPR1P32603 445 aa3.8□□□□□ -1.8
CUS1YMR240C PFS1P38872 237 aa3.8□□□□□ -1.8
CUS1YMR240C AIM23P47015 356 aa3.8□□□□□ -1.8
CUS1YMR240C SUR7P54003 302 aa3.8□□□□□ -1.8
CUS1YMR240C SPO19Q03029 223 aa3.8□□□□□ -1.8
CUS1YMR240C ECM18Q04623 453 aa3.8□□□□□ -1.8
CUS1YMR240C RLP24Q07915 199 aaKnown RBP3.8□□□□□ -1.8
CUS1YMR240C DDC1Q08949 612 aa3.8□□□□□ -1.8
CUS1YMR240C RPN6Q12377 434 aa3.8□□□□□ -1.8
CUS1YMR240C CAR2P07991 424 aaKnown RBP3.79□□□□□ -1.8
CUS1YMR240C UNG1P12887 359 aa3.79□□□□□ -1.8
CUS1YMR240C ITR2P30606 609 aa3.79□□□□□ -1.8
CUS1YMR240C COS9P36034 407 aa3.79□□□□□ -1.8
CUS1YMR240C YKL162CP36052 402 aa3.79□□□□□ -1.8
CUS1YMR240C FET3P38993 636 aa3.79□□□□□ -1.8
CUS1YMR240C MOB2P43563 287 aa3.79□□□□□ -1.8
CUS1YMR240C YLR152CP54072 576 aa3.79□□□□□ -1.8
CUS1YMR240C SLT2Q00772 484 aa3.79□□□□□ -1.8
CUS1YMR240C UBX2Q04228 584 aa3.79□□□□□ -1.8
CUS1YMR240C SLF1Q12034 447 aaKnown RBP3.79□□□□□ -1.8
CUS1YMR240C PUT4P15380 627 aa3.78□□□□□ -1.8
CUS1YMR240C UGA1P17649 471 aa3.78□□□□□ -1.8
CUS1YMR240C YOX1P34161 385 aa3.78□□□□□ -1.8
CUS1YMR240C SOL2P37262 315 aa3.78□□□□□ -1.8
CUS1YMR240C MKC7P53379 596 aa3.78□□□□□ -1.8
CUS1YMR240C HCH1P53834 153 aa3.78□□□□□ -1.8
CUS1YMR240C ENT5Q03769 411 aaKnown RBP3.78□□□□□ -1.8
CUS1YMR240C APC4Q04601 652 aa3.78□□□□□ -1.8
CUS1YMR240C YLR177WQ06251 628 aa3.78□□□□□ -1.8
CUS1YMR240C YLR413WQ06689 675 aa3.78□□□□□ -1.8
CUS1YMR240C YPR1Q12458 312 aa3.78□□□□□ -1.8
CUS1YMR240C REV1P12689 985 aa3.77□□□□□ -1.81
CUS1YMR240C CMK2P22517 447 aa3.77□□□□□ -1.81
CUS1YMR240C MEI5P32489 222 aa3.77□□□□□ -1.81
CUS1YMR240C SMF2P38778 549 aa3.77□□□□□ -1.81
CUS1YMR240C FHL1P39521 936 aa3.77□□□□□ -1.81
CUS1YMR240C ALD5P40047 520 aaKnown RBP3.77□□□□□ -1.81
CUS1YMR240C RTT105P40063 208 aa3.77□□□□□ -1.81
CUS1YMR240C SEH1P53011 349 aaKnown RBP3.77□□□□□ -1.81
CUS1YMR240C YGL039WP53183 348 aaKnown RBP3.77□□□□□ -1.81
CUS1YMR240C PNC1P53184 216 aaKnown RBP3.77□□□□□ -1.81
CUS1YMR240C VHT1P53241 593 aa3.77□□□□□ -1.81
CUS1YMR240C ERV41Q04651 352 aa3.77□□□□□ -1.81
CUS1YMR240C TMC1Q08422 150 aaPredicted RBP3.77□□□□□ -1.81
CUS1YMR240C SAM4Q08985 325 aaKnown RBP3.77□□□□□ -1.81
CUS1YMR240C SAL1D6W196 494 aa3.76□□□□□ -1.81
CUS1YMR240C GAL7P08431 366 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms