RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W RAD1P06777 1100 aa4.41□□□□□ -1.7
ROT1YMR200W YBR121C-AP0C5L4 52 aa4.41□□□□□ -1.7
ROT1YMR200W FBA1P14540 359 aaKnown RBP4.41□□□□□ -1.7
ROT1YMR200W YMR31P19955 123 aa4.41□□□□□ -1.7
ROT1YMR200W VAM7P32912 316 aa4.41□□□□□ -1.7
ROT1YMR200W UBC6P33296 250 aaPredicted RBP4.41□□□□□ -1.7
ROT1YMR200W RSM22P36056 628 aa4.41□□□□□ -1.7
ROT1YMR200W TDA11P38854 504 aa4.41□□□□□ -1.7
ROT1YMR200W THO1P40040 218 aaKnown RBP4.41□□□□□ -1.7
ROT1YMR200W TDA10P42938 290 aa4.41□□□□□ -1.7
ROT1YMR200W IBA57P47158 497 aa4.41□□□□□ -1.7
ROT1YMR200W AZR1P50080 613 aa4.41□□□□□ -1.7
ROT1YMR200W YGL159WP53110 370 aa4.41□□□□□ -1.7
ROT1YMR200W SLX9P53251 210 aaPredicted RBP4.41□□□□□ -1.7
ROT1YMR200W OKP1P53298 406 aa4.41□□□□□ -1.7
ROT1YMR200W NOP19P53317 196 aaPredicted RBP4.41□□□□□ -1.7
ROT1YMR200W MKC7P53379 596 aa4.41□□□□□ -1.7
ROT1YMR200W ASI1P54074 624 aa4.41□□□□□ -1.7
ROT1YMR200W YPL080CQ02826 108 aa4.41□□□□□ -1.7
ROT1YMR200W RSC9Q03124 581 aa4.41□□□□□ -1.7
ROT1YMR200W HER2Q03557 464 aa4.41□□□□□ -1.7
ROT1YMR200W IVY1Q04934 453 aa4.41□□□□□ -1.7
ROT1YMR200W FAR8Q05040 523 aa4.41□□□□□ -1.7
ROT1YMR200W ABP140Q08641 628 aaKnown RBP4.41□□□□□ -1.7
ROT1YMR200W YOR387CQ08910 206 aa4.41□□□□□ -1.7
ROT1YMR200W YLR111WQ12528 110 aa4.41□□□□□ -1.7
ROT1YMR200W YKL183C-AQ3E765 70 aa4.41□□□□□ -1.7
ROT1YMR200W ARF2P19146 181 aaKnown RBP4.4□□□□□ -1.71
ROT1YMR200W RPO26P20435 155 aa4.4□□□□□ -1.71
ROT1YMR200W IDH1P28834 360 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
ROT1YMR200W ACB1P31787 87 aa4.4□□□□□ -1.71
ROT1YMR200W YPT52P36018 234 aaKnown RBP4.4□□□□□ -1.71
ROT1YMR200W ATG7P38862 630 aa4.4□□□□□ -1.71
ROT1YMR200W FAA2P39518 744 aa4.4□□□□□ -1.71
ROT1YMR200W FAU1P40099 211 aa4.4□□□□□ -1.71
ROT1YMR200W RPC17P47076 161 aa4.4□□□□□ -1.71
ROT1YMR200W GET1P53192 235 aa4.4□□□□□ -1.71
ROT1YMR200W EAF7P53911 425 aaKnown RBP4.4□□□□□ -1.71
ROT1YMR200W VAC7P53950 1165 aa4.4□□□□□ -1.71
ROT1YMR200W CAC2Q04199 468 aa4.4□□□□□ -1.71
ROT1YMR200W BSP1Q06604 576 aa4.4□□□□□ -1.71
ROT1YMR200W APC9Q12107 265 aa4.4□□□□□ -1.71
ROT1YMR200W RKM5Q12367 367 aa4.4□□□□□ -1.71
ROT1YMR200W MRPL8P22353 238 aa4.39□□□□□ -1.71
ROT1YMR200W TAF14P35189 244 aa4.39□□□□□ -1.71
ROT1YMR200W DTR1P38125 572 aa4.39□□□□□ -1.71
ROT1YMR200W APD1P38281 316 aa4.39□□□□□ -1.71
ROT1YMR200W ERV46P39727 415 aa4.39□□□□□ -1.71
ROT1YMR200W MIG2P53035 382 aa4.39□□□□□ -1.71
ROT1YMR200W GPI1P53306 609 aa4.39□□□□□ -1.71
ROT1YMR200W YMR034CQ05131 434 aaPredicted RBP4.39□□□□□ -1.71
ROT1YMR200W ATG17Q06410 417 aa4.39□□□□□ -1.71
ROT1YMR200W MCH4Q08268 501 aa4.39□□□□□ -1.71
ROT1YMR200W RDL1Q12305 139 aaKnown RBP4.39□□□□□ -1.71
ROT1YMR200W ATP6P00854 259 aa4.38□□□□□ -1.71
ROT1YMR200W RPB8P20436 146 aa4.38□□□□□ -1.71
ROT1YMR200W FAR1P21268 830 aa4.38□□□□□ -1.71
ROT1YMR200W RBK1P25332 333 aa4.38□□□□□ -1.71
ROT1YMR200W NUP2P32499 720 aa4.38□□□□□ -1.71
ROT1YMR200W UTR4P32626 227 aa4.38□□□□□ -1.71
ROT1YMR200W TOA2P32774 122 aa4.38□□□□□ -1.71
ROT1YMR200W VPS21P36017 210 aaKnown RBP4.38□□□□□ -1.71
ROT1YMR200W RIM2P38127 377 aa4.38□□□□□ -1.71
ROT1YMR200W IST2P38250 946 aa4.38□□□□□ -1.71
ROT1YMR200W LYS1P38998 373 aaRIP-Chip data4.38□□□□□ -1.71not detected
ROT1YMR200W CCT4P39078 528 aaKnown RBP4.38□□□□□ -1.71
ROT1YMR200W YIR016WP40572 265 aa4.38□□□□□ -1.71
ROT1YMR200W SCS3P53012 380 aa4.38□□□□□ -1.71
ROT1YMR200W SOL4P53315 255 aa4.38□□□□□ -1.71
ROT1YMR200W RHO4Q00246 291 aa4.38□□□□□ -1.71
ROT1YMR200W EBS1Q03466 884 aaKnown RBP4.38□□□□□ -1.71
ROT1YMR200W YDR209CQ03480 137 aa4.38□□□□□ -1.71
ROT1YMR200W ASR1Q06834 288 aa4.38□□□□□ -1.71
ROT1YMR200W SSK1Q07084 712 aa4.38□□□□□ -1.71
ROT1YMR200W YDL144CQ07589 356 aa4.38□□□□□ -1.71
ROT1YMR200W POM33Q12164 279 aa4.38□□□□□ -1.71
ROT1YMR200W YDR157WA0A023PZE8 133 aa4.37□□□□□ -1.71
ROT1YMR200W QCR7P00128 127 aa4.37□□□□□ -1.71
ROT1YMR200W BUB3P26449 341 aa4.37□□□□□ -1.71
ROT1YMR200W ZRT1P32804 376 aa4.37□□□□□ -1.71
ROT1YMR200W PDR3P33200 976 aa4.37□□□□□ -1.71
ROT1YMR200W URA8P38627 578 aaPredicted RBP4.37□□□□□ -1.71
ROT1YMR200W RBG1P39729 369 aa4.37□□□□□ -1.71
ROT1YMR200W COX15P40086 486 aa4.37□□□□□ -1.71
ROT1YMR200W DDI1P40087 428 aa4.37□□□□□ -1.71
ROT1YMR200W IDP2P41939 412 aa4.37□□□□□ -1.71
ROT1YMR200W SNO3P43544 222 aa4.37□□□□□ -1.71
ROT1YMR200W RTT101P47050 842 aa4.37□□□□□ -1.71
ROT1YMR200W TAD2P47058 250 aa4.37□□□□□ -1.71
ROT1YMR200W HOC1P47124 396 aa4.37□□□□□ -1.71
ROT1YMR200W ORC5P50874 479 aa4.37□□□□□ -1.71
ROT1YMR200W YIP1P53039 248 aa4.37□□□□□ -1.71
ROT1YMR200W LST7P53237 242 aa4.37□□□□□ -1.71
ROT1YMR200W ERG13P54839 491 aaKnown RBP4.37□□□□□ -1.71
ROT1YMR200W SKI8Q02793 397 aaPredicted RBP4.37□□□□□ -1.71
ROT1YMR200W NDE2Q07500 545 aa4.37□□□□□ -1.71
ROT1YMR200W YDL218WQ07629 317 aa4.37□□□□□ -1.71
ROT1YMR200W SKI7Q08491 747 aaPredicted RBP4.37□□□□□ -1.71
ROT1YMR200W ORT1Q12375 292 aa4.37□□□□□ -1.71
ROT1YMR200W YOP1Q12402 180 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms