RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W ALG11P53954 548 aaKnown RBP3.21□□□□□ -1.9
CSM3YMR048W NUP116Q02630 1113 aa3.21□□□□□ -1.9
CSM3YMR048W RCF1Q03713 159 aa3.21□□□□□ -1.9
CSM3YMR048W SNT309Q06091 175 aaPredicted RBP3.21□□□□□ -1.9
CSM3YMR048W NCA2Q12374 616 aa3.21□□□□□ -1.9
CSM3YMR048W FKS1P38631 1876 aaKnown RBP3.2□□□□□ -1.9
CSM3YMR048W HAP2P06774 265 aa3.2□□□□□ -1.9
CSM3YMR048W ATP1P07251 545 aaKnown RBP3.2□□□□□ -1.9
CSM3YMR048W NFT1P0CE68 1218 aa3.2□□□□□ -1.9
CSM3YMR048W RPL1AP0CX43 217 aaKnown RBP3.2□□□□□ -1.9
CSM3YMR048W RPL1BP0CX44 217 aaKnown RBP3.2□□□□□ -1.9
CSM3YMR048W ASP3-2P0CX77 362 aa3.2□□□□□ -1.9
CSM3YMR048W ASP3-3P0CX78 362 aa3.2□□□□□ -1.9
CSM3YMR048W ASP3-4P0CX79 362 aa3.2□□□□□ -1.9
CSM3YMR048W ASP3-1P0CZ17 362 aa3.2□□□□□ -1.9
CSM3YMR048W POT1P27796 417 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CSM3YMR048W POP5P28005 173 aa3.2□□□□□ -1.9
CSM3YMR048W NIP1P32497 812 aaKnown RBP3.2□□□□□ -1.9
CSM3YMR048W NRP1P32770 719 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
CSM3YMR048W SKN1P33336 771 aa3.2□□□□□ -1.9
CSM3YMR048W COX14P39103 70 aa3.2□□□□□ -1.9
CSM3YMR048W MAL13P53338 473 aa3.2□□□□□ -1.9
CSM3YMR048W RPL22BP56628 122 aaKnown RBP3.2□□□□□ -1.9
CSM3YMR048W IRC25Q07951 179 aa3.2□□□□□ -1.9
CSM3YMR048W JIP3O13555 125 aa3.19□□□□□ -1.9
CSM3YMR048W RSA4P25382 515 aaKnown RBP3.19□□□□□ -1.9
CSM3YMR048W EFB1P32471 206 aaKnown RBP3.19□□□□□ -1.9
CSM3YMR048W UBC6P33296 250 aaPredicted RBP3.19□□□□□ -1.9
CSM3YMR048W CSG2P35206 410 aa3.19□□□□□ -1.9
CSM3YMR048W DRE2P36152 348 aa3.19□□□□□ -1.9
CSM3YMR048W KAP104P38217 918 aaKnown RBP3.19□□□□□ -1.9
CSM3YMR048W TCD1P38756 429 aa3.19□□□□□ -1.9
CSM3YMR048W GPI16P38875 610 aa3.19□□□□□ -1.9
CSM3YMR048W JLP2P40206 208 aa3.19□□□□□ -1.9
CSM3YMR048W MTQ1P53944 314 aa3.19□□□□□ -1.9
CSM3YMR048W NSE1Q07913 336 aa3.19□□□□□ -1.9
CSM3YMR048W RIO1Q12196 484 aaKnown RBP3.19□□□□□ -1.9
CSM3YMR048W YDR524C-BQ3E6R4 66 aa3.19□□□□□ -1.9
CSM3YMR048W AI5_BETAQ9ZZX0 354 aa3.19□□□□□ -1.9
CSM3YMR048W HMT1P38074 348 aa3.18□□□□□ -1.9
CSM3YMR048W QDR3P38227 689 aa3.18□□□□□ -1.9
CSM3YMR048W WSS1P38838 269 aa3.18□□□□□ -1.9
CSM3YMR048W MNL1P38888 796 aa3.18□□□□□ -1.9
CSM3YMR048W YER186CP40101 306 aa3.18□□□□□ -1.9
CSM3YMR048W PAC11P40960 533 aa3.18□□□□□ -1.9
CSM3YMR048W RPC17P47076 161 aa3.18□□□□□ -1.9
CSM3YMR048W CPR7P47103 393 aa3.18□□□□□ -1.9
CSM3YMR048W MND1P53102 219 aa3.18□□□□□ -1.9
CSM3YMR048W SPR6Q01684 191 aa3.18□□□□□ -1.9
CSM3YMR048W RNY1Q02933 434 aaKnown RBP3.18□□□□□ -1.9
CSM3YMR048W YDR541CQ03049 344 aa3.18□□□□□ -1.9
CSM3YMR048W MZM1Q03429 123 aaPredicted RBP3.18□□□□□ -1.9
CSM3YMR048W SHS1Q07657 551 aa3.18□□□□□ -1.9
CSM3YMR048W ABP140Q08641 628 aaKnown RBP3.18□□□□□ -1.9
CSM3YMR048W RAX1Q08760 435 aa3.18□□□□□ -1.9
CSM3YMR048W YDR061WQ12298 539 aa3.18□□□□□ -1.9
CSM3YMR048W RPL6BP05739 176 aaKnown RBP3.17□□□□□ -1.9
CSM3YMR048W CYC3P06182 269 aa3.17□□□□□ -1.9
CSM3YMR048W PUT4P15380 627 aa3.17□□□□□ -1.9
CSM3YMR048W CDC42P19073 191 aa3.17□□□□□ -1.9
CSM3YMR048W RRP7P25368 297 aaPredicted RBP3.17□□□□□ -1.9
CSM3YMR048W PRR1P28708 518 aa3.17□□□□□ -1.9
CSM3YMR048W YKL097CP34245 136 aa3.17□□□□□ -1.9
CSM3YMR048W DOA1P36037 715 aa3.17□□□□□ -1.9
CSM3YMR048W RPC37P36121 282 aa3.17□□□□□ -1.9
CSM3YMR048W RCK2P38623 610 aa3.17□□□□□ -1.9
CSM3YMR048W STP2P38704 541 aa3.17□□□□□ -1.9
CSM3YMR048W BTT1P40314 149 aaPredicted RBP3.17□□□□□ -1.9
CSM3YMR048W ATM1P40416 690 aa3.17□□□□□ -1.9
CSM3YMR048W MDE1P47095 244 aa3.17□□□□□ -1.9
CSM3YMR048W KAP114P53067 1004 aa3.17□□□□□ -1.9
CSM3YMR048W MEH1Q02205 184 aa3.17□□□□□ -1.9
CSM3YMR048W RPL6AQ02326 176 aaKnown RBP3.17□□□□□ -1.9
CSM3YMR048W ADA2Q02336 434 aa3.17□□□□□ -1.9
CSM3YMR048W SML1Q04964 104 aa3.17□□□□□ -1.9
CSM3YMR048W VAC14Q06708 880 aa3.17□□□□□ -1.9
CSM3YMR048W CDC8P00572 216 aa3.16□□□□□ -1.9
CSM3YMR048W OPI3P05375 206 aa3.16□□□□□ -1.9
CSM3YMR048W CAP2P13517 287 aa3.16□□□□□ -1.9
CSM3YMR048W EXG1P23776 448 aaKnown RBP3.16□□□□□ -1.9
CSM3YMR048W NUP2P32499 720 aa3.16□□□□□ -1.9
CSM3YMR048W TKL2P33315 681 aa3.16□□□□□ -1.9
CSM3YMR048W RPC25P35718 212 aa3.16□□□□□ -1.9
CSM3YMR048W HIS2P38635 335 aa3.16□□□□□ -1.9
CSM3YMR048W SBE22P38814 852 aa3.16□□□□□ -1.9
CSM3YMR048W DSE1P40077 573 aa3.16□□□□□ -1.9
CSM3YMR048W MAM33P40513 266 aa3.16□□□□□ -1.9
CSM3YMR048W CHS6P40955 746 aa3.16□□□□□ -1.9
CSM3YMR048W GAB1P41733 394 aa3.16□□□□□ -1.9
CSM3YMR048W SNZ3P43545 298 aa3.16□□□□□ -1.9
CSM3YMR048W YIP5P53108 310 aa3.16□□□□□ -1.9
CSM3YMR048W MRM2P53123 320 aa3.16□□□□□ -1.9
CSM3YMR048W PEX31P53203 462 aa3.16□□□□□ -1.9
CSM3YMR048W SNZ2P53824 298 aa3.16□□□□□ -1.9
CSM3YMR048W TAF9Q05027 157 aa3.16□□□□□ -1.9
CSM3YMR048W GRX8Q05926 109 aa3.16□□□□□ -1.9
CSM3YMR048W YOL075CQ08234 1294 aa3.16□□□□□ -1.9
CSM3YMR048W CUE5Q08412 411 aaKnown RBP3.16□□□□□ -1.9
CSM3YMR048W GPM2Q12008 311 aa3.16□□□□□ -1.9
CSM3YMR048W TPK3P05986 398 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms