RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YMR134WP40207 237 aa1.69□□□□□ -2.14
SGD1YLR336C YGL114WP53134 725 aa1.69□□□□□ -2.14
SGD1YLR336C LSG1P53145 640 aaKnown RBP1.69□□□□□ -2.14
SGD1YLR336C CDH1P53197 566 aa1.69□□□□□ -2.14
SGD1YLR336C YMR010WQ03687 405 aa1.69□□□□□ -2.14
SGD1YLR336C RPN6Q12377 434 aa1.69□□□□□ -2.14
SGD1YLR336C ADH1P00330 348 aaKnown RBP1.68□□□□□ -2.14
SGD1YLR336C GAL3P13045 520 aa1.68□□□□□ -2.14
SGD1YLR336C PRS1P32895 427 aaKnown RBP1.68□□□□□ -2.14
SGD1YLR336C PDC2P32896 925 aa1.68□□□□□ -2.14
SGD1YLR336C SUR1P33300 382 aa1.68□□□□□ -2.14
SGD1YLR336C SRB2P34162 210 aa1.68□□□□□ -2.14
SGD1YLR336C AIM23P47015 356 aa1.68□□□□□ -2.14
SGD1YLR336C YPS5P53057 165 aa1.68□□□□□ -2.14
SGD1YLR336C YNL146WP53906 100 aa1.68□□□□□ -2.14
SGD1YLR336C SCS7Q03529 384 aa1.68□□□□□ -2.14
SGD1YLR336C HMS1Q12398 434 aa1.68□□□□□ -2.14
SGD1YLR336C MRPL27P36526 146 aaPredicted RBP1.68□□□□□ -2.14
SGD1YLR336C MRP21P38175 177 aa1.68□□□□□ -2.14
SGD1YLR336C GPI18P38211 433 aa1.68□□□□□ -2.14
SGD1YLR336C OSW5P40219 148 aa1.68□□□□□ -2.14
SGD1YLR336C AIM20P40451 204 aa1.68□□□□□ -2.14
SGD1YLR336C YJR054WP47114 497 aa1.68□□□□□ -2.14
SGD1YLR336C VPS20Q04272 221 aa1.68□□□□□ -2.14
SGD1YLR336C YDR115WQ04598 105 aa1.68□□□□□ -2.14
SGD1YLR336C GAS2Q06135 555 aa1.68□□□□□ -2.14
SGD1YLR336C YDR262WQ12331 272 aa1.68□□□□□ -2.14
SGD1YLR336C STF1P01098 86 aa1.68□□□□□ -2.14
SGD1YLR336C STE7P06784 515 aa1.68□□□□□ -2.14
SGD1YLR336C LDS1P31379 325 aa1.68□□□□□ -2.14
SGD1YLR336C SOL2P37262 315 aa1.68□□□□□ -2.14
SGD1YLR336C MMS21P38632 267 aa1.68□□□□□ -2.14
SGD1YLR336C SMF2P38778 549 aa1.68□□□□□ -2.14
SGD1YLR336C BTT1P40314 149 aaPredicted RBP1.68□□□□□ -2.14
SGD1YLR336C BIO3P50277 480 aa1.68□□□□□ -2.14
SGD1YLR336C YGR015CP53208 328 aa1.68□□□□□ -2.14
SGD1YLR336C TAF10Q12030 206 aa1.68□□□□□ -2.14
SGD1YLR336C RNR2P09938 399 aaKnown RBP1.67□□□□□ -2.14
SGD1YLR336C YBR241CP38142 488 aa1.67□□□□□ -2.14
SGD1YLR336C VHT1P53241 593 aa1.67□□□□□ -2.14
SGD1YLR336C RMI1Q02685 241 aa1.67□□□□□ -2.14
SGD1YLR336C RPL21BQ12672 160 aaKnown RBP1.67□□□□□ -2.14
SGD1YLR336C VPS63O13549 108 aa1.67□□□□□ -2.14
SGD1YLR336C RPL18AP0CX49 186 aaKnown RBP1.67□□□□□ -2.14
SGD1YLR336C RPL18BP0CX50 186 aaKnown RBP1.67□□□□□ -2.14
SGD1YLR336C ERG9P29704 444 aa1.67□□□□□ -2.14
SGD1YLR336C ECT1P33412 323 aa1.67□□□□□ -2.14
SGD1YLR336C SHE1P38200 338 aa1.67□□□□□ -2.14
SGD1YLR336C YGL262WP53054 175 aa1.67□□□□□ -2.14
SGD1YLR336C CWC22P53333 577 aaKnown RBP1.67□□□□□ -2.14
SGD1YLR336C SLT2Q00772 484 aa1.67□□□□□ -2.14
SGD1YLR336C HIF1Q12373 385 aa1.67□□□□□ -2.14
SGD1YLR336C NOP1P15646 327 aaKnown RBP1.66□□□□□ -2.14
SGD1YLR336C SMP1P38128 452 aa1.66□□□□□ -2.14
SGD1YLR336C YDR089WP38966 869 aa1.66□□□□□ -2.14
SGD1YLR336C SEO1P39709 593 aa1.66□□□□□ -2.14
SGD1YLR336C YNL320WP42840 284 aa1.66□□□□□ -2.14
SGD1YLR336C MOB2P43563 287 aa1.66□□□□□ -2.14
SGD1YLR336C RPL21AQ02753 160 aaKnown RBP1.66□□□□□ -2.14
SGD1YLR336C BSC6Q08280 497 aa1.66□□□□□ -2.14
SGD1YLR336C RGS2Q99188 309 aa1.66□□□□□ -2.14
SGD1YLR336C DCC1P25559 380 aa1.66□□□□□ -2.14
SGD1YLR336C YPS1P32329 569 aa1.66□□□□□ -2.14
SGD1YLR336C PCH2P38126 564 aa1.66□□□□□ -2.14
SGD1YLR336C BMT2P38278 337 aa1.66□□□□□ -2.14
SGD1YLR336C PEX22P39718 180 aa1.66□□□□□ -2.14
SGD1YLR336C STB1P42845 420 aa1.66□□□□□ -2.14
SGD1YLR336C PXR1P53335 271 aaPredicted RBP1.66□□□□□ -2.14
SGD1YLR336C TPS1Q00764 495 aaKnown RBP1.66□□□□□ -2.14
SGD1YLR336C MGR3Q04472 501 aa1.66□□□□□ -2.14
SGD1YLR336C BUR2Q05949 395 aa1.66□□□□□ -2.14
SGD1YLR336C ALE1Q08548 619 aa1.66□□□□□ -2.14
SGD1YLR336C DDC1Q08949 612 aa1.66□□□□□ -2.14
SGD1YLR336C SRO7Q12038 1033 aa1.66□□□□□ -2.14
SGD1YLR336C RTC5Q12108 567 aaKnown RBP1.66□□□□□ -2.14
SGD1YLR336C FOL3Q12676 427 aaPredicted RBP1.66□□□□□ -2.14
SGD1YLR336C PSK1P31374 1356 aa1.65□□□□□ -2.14
SGD1YLR336C CDC37P06101 506 aaKnown RBP1.65□□□□□ -2.15
SGD1YLR336C CBP6P07253 162 aaPredicted RBP1.65□□□□□ -2.15
SGD1YLR336C COS9P36034 407 aa1.65□□□□□ -2.15
SGD1YLR336C PES4P39684 611 aa1.65□□□□□ -2.15
SGD1YLR336C SSO2P39926 295 aa1.65□□□□□ -2.15
SGD1YLR336C TAF6P53040 516 aa1.65□□□□□ -2.15
SGD1YLR336C MKC7P53379 596 aa1.65□□□□□ -2.15
SGD1YLR336C MRX11Q03079 207 aa1.65□□□□□ -2.15
SGD1YLR336C CAB5Q03941 241 aa1.65□□□□□ -2.15
SGD1YLR336C BUD2P33314 1104 aa1.65□□□□□ -2.15
SGD1YLR336C YKL162CP36052 402 aa1.65□□□□□ -2.15
SGD1YLR336C CHL4P38907 458 aa1.65□□□□□ -2.15
SGD1YLR336C YGR168CP53293 376 aa1.65□□□□□ -2.15
SGD1YLR336C RNH201P53942 307 aa1.65□□□□□ -2.15
SGD1YLR336C CUR1Q06469 252 aa1.65□□□□□ -2.15
SGD1YLR336C PAA1Q12447 191 aaKnown RBP1.65□□□□□ -2.15
SGD1YLR336C YOL085CQ99345 113 aa1.65□□□□□ -2.15
SGD1YLR336C REP1P03871 373 aa1.64□□□□□ -2.15
SGD1YLR336C CBP2P03874 630 aaPredicted RBP1.64□□□□□ -2.15
SGD1YLR336C VMA5P31412 392 aaKnown RBP1.64□□□□□ -2.15
SGD1YLR336C DTR1P38125 572 aa1.64□□□□□ -2.15
SGD1YLR336C SWC5P38326 303 aa1.64□□□□□ -2.15
SGD1YLR336C RIB4P50861 169 aaPredicted RBP1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms