RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C SSN3P39073 555 aa1.72□□□□□ -2.13
IRC20YLR247C VFA1P40080 203 aa1.72□□□□□ -2.13
IRC20YLR247C YFL012WP43580 148 aa1.72□□□□□ -2.13
IRC20YLR247C AAD10P47182 288 aa1.72□□□□□ -2.13
IRC20YLR247C NBP1P52919 319 aaPredicted RBP1.72□□□□□ -2.13
IRC20YLR247C RSM27P53305 110 aa1.72□□□□□ -2.13
IRC20YLR247C MAL12P53341 584 aa1.72□□□□□ -2.13
IRC20YLR247C YTP1P53584 459 aa1.72□□□□□ -2.13
IRC20YLR247C NUP49Q02199 472 aa1.72□□□□□ -2.13
IRC20YLR247C YPL068CQ02749 293 aa1.72□□□□□ -2.13
IRC20YLR247C MTG1Q03151 367 aaPredicted RBP1.72□□□□□ -2.13
IRC20YLR247C RSN1Q03516 953 aa1.72□□□□□ -2.13
IRC20YLR247C ARG7Q04728 441 aa1.72□□□□□ -2.13
IRC20YLR247C MRX10Q05648 414 aa1.72□□□□□ -2.13
IRC20YLR247C YTH1Q06102 208 aaPredicted RBP1.72□□□□□ -2.13
IRC20YLR247C YLR012CQ07927 99 aa1.72□□□□□ -2.13
IRC20YLR247C YOL075CQ08234 1294 aa1.72□□□□□ -2.13
IRC20YLR247C BRX1Q08235 291 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C OSW1Q08692 278 aa1.72□□□□□ -2.13
IRC20YLR247C TIP41Q12199 356 aa1.72□□□□□ -2.13
IRC20YLR247C ADH3P07246 375 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C PET122P10355 254 aa1.72□□□□□ -2.13
IRC20YLR247C ARF1P11076 181 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C PMR1P13586 950 aa1.72□□□□□ -2.13
IRC20YLR247C URA6P15700 204 aa1.72□□□□□ -2.13
IRC20YLR247C RPB3P16370 318 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C CTR86P25355 563 aa1.72□□□□□ -2.13
IRC20YLR247C SPS22P25380 463 aa1.72□□□□□ -2.13
IRC20YLR247C SYP1P25623 870 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C LOT5P34234 306 aa1.72□□□□□ -2.13
IRC20YLR247C UTP11P34247 250 aaPredicted RBP1.72□□□□□ -2.13
IRC20YLR247C PCH2P38126 564 aa1.72□□□□□ -2.13
IRC20YLR247C YBR062CP38239 180 aa1.72□□□□□ -2.13
IRC20YLR247C YBR138CP38277 524 aa1.72□□□□□ -2.13
IRC20YLR247C MMS21P38632 267 aa1.72□□□□□ -2.13
IRC20YLR247C PEX18P38855 283 aa1.72□□□□□ -2.13
IRC20YLR247C SVP26P38869 228 aa1.72□□□□□ -2.13
IRC20YLR247C RPH1P39956 796 aa1.72□□□□□ -2.13
IRC20YLR247C YEL075CP39972 122 aa1.72□□□□□ -2.13
IRC20YLR247C RPL13BP40212 199 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C ATF1P40353 525 aa1.72□□□□□ -2.13
IRC20YLR247C MET12P46151 657 aa1.72□□□□□ -2.13
IRC20YLR247C GTO1P48239 356 aa1.72□□□□□ -2.13
IRC20YLR247C RPS12P48589 143 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C UBP8P50102 471 aa1.72□□□□□ -2.13
IRC20YLR247C IMA1P53051 589 aa1.72□□□□□ -2.13
IRC20YLR247C MDM34P53083 459 aa1.72□□□□□ -2.13
IRC20YLR247C PDR16P53860 351 aaKnown RBP1.72□□□□□ -2.13
IRC20YLR247C ACS1Q01574 713 aa1.72□□□□□ -2.13
IRC20YLR247C OAZ1Q02803 292 aa1.72□□□□□ -2.13
IRC20YLR247C GAD1Q04792 585 aa1.72□□□□□ -2.13
IRC20YLR247C SNT309Q06091 175 aaPredicted RBP1.72□□□□□ -2.13
IRC20YLR247C MDM36Q06820 579 aa1.72□□□□□ -2.13
IRC20YLR247C ASR1Q06834 288 aa1.72□□□□□ -2.13
IRC20YLR247C YDL086WQ07505 273 aa1.72□□□□□ -2.13
IRC20YLR247C AFT2Q08957 416 aa1.72□□□□□ -2.13
IRC20YLR247C YOR342CQ12182 319 aa1.72□□□□□ -2.13
IRC20YLR247C MHT1Q12525 324 aa1.72□□□□□ -2.13
IRC20YLR247C RPL13AQ12690 199 aaPredicted RBP1.72□□□□□ -2.13
IRC20YLR247C GPM1P00950 247 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C PPR1P07272 904 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C MET2P08465 486 aa1.71□□□□□ -2.14
IRC20YLR247C GFA1P14742 717 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C PHO85P17157 305 aa1.71□□□□□ -2.14
IRC20YLR247C FUN14P18411 198 aa1.71□□□□□ -2.14
IRC20YLR247C SAN1P22470 610 aa1.71□□□□□ -2.14
IRC20YLR247C CPR4P25334 318 aa1.71□□□□□ -2.14
IRC20YLR247C GFD2P25370 566 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C URA7P28274 579 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C MKK1P32490 508 aa1.71□□□□□ -2.14
IRC20YLR247C SOF1P33750 489 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C PIN4P34217 668 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
IRC20YLR247C APS1P35181 156 aa1.71□□□□□ -2.14
IRC20YLR247C YNK1P36010 153 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C DOA1P36037 715 aa1.71□□□□□ -2.14
IRC20YLR247C YPT10P38146 199 aa1.71□□□□□ -2.14
IRC20YLR247C TSC10P38342 320 aa1.71□□□□□ -2.14
IRC20YLR247C CUE1P38428 203 aa1.71□□□□□ -2.14
IRC20YLR247C TIF34P40217 347 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C MPS3P47069 682 aa1.71□□□□□ -2.14
IRC20YLR247C ARE2P53629 642 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C ARG5,6Q01217 863 aa1.71□□□□□ -2.14
IRC20YLR247C YMR181CQ03231 154 aa1.71□□□□□ -2.14
IRC20YLR247C NUP53Q03790 475 aa1.71□□□□□ -2.14
IRC20YLR247C MRPS8Q03799 155 aa1.71□□□□□ -2.14
IRC20YLR247C EMG1Q06287 252 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C PEX27Q08580 376 aa1.71□□□□□ -2.14
IRC20YLR247C DDC1Q08949 612 aa1.71□□□□□ -2.14
IRC20YLR247C YPL261CQ08976 102 aa1.71□□□□□ -2.14
IRC20YLR247C BTS1Q12051 335 aa1.71□□□□□ -2.14
IRC20YLR247C LEU9Q12166 604 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C PCC1Q3E833 88 aa1.71□□□□□ -2.14
IRC20YLR247C MF(ALPHA)1P01149 165 aa1.71□□□□□ -2.14
IRC20YLR247C FRS2P15625 503 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C MET8P15807 274 aa1.71□□□□□ -2.14
IRC20YLR247C PDA1P16387 420 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C TYR1P20049 452 aa1.71□□□□□ -2.14
IRC20YLR247C RFA1P22336 621 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C ATP7P30902 174 aa1.71□□□□□ -2.14
IRC20YLR247C SSH4P32343 579 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms