RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YGR015C	P53208	328 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	RPL21A	Q02753	160 aa	Known RBP	3.39	□□□□□ -1.87
EBP2	YKL172W	NAT4	Q04751	285 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	SRO7	Q12038	1033 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	RPL21B	Q12672	160 aa	Known RBP	3.39	□□□□□ -1.87
EBP2	YKL172W	RGS2	Q99188	309 aa		3.39	□□□□□ -1.87
EBP2	YKL172W	ADH1	P00330	348 aa	Known RBP	3.38	□□□□□ -1.87
EBP2	YKL172W	HXT2	P23585	541 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	MXR2	P25566	168 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	ERG9	P29704	444 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	SHE1	P38200	338 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	YFL012W	P43580	148 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	YGR016W	P53209	190 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	YGR018C	P53211	109 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	YNL146W	P53906	100 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	TRM82	Q03774	444 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	YOR012W	Q12351	137 aa		3.38	□□□□□ -1.87
EBP2	YKL172W	YLL053C	P0CD98	152 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	PEX32	P38292	413 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	ATG7	P38862	630 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	CHL4	P38907	458 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	ATP22	P50273	684 aa	Predicted RBP	3.37	□□□□□ -1.87
EBP2	YKL172W	FLC3	P53121	802 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	HST1	P53685	503 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	CSM3	Q04659	317 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	PML1	Q07930	204 aa	Predicted RBP	3.37	□□□□□ -1.87
EBP2	YKL172W	ALE1	Q08548	619 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	SLM3	Q12093	417 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	FRE8	Q12209	686 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	PSY3	Q12318	242 aa		3.37	□□□□□ -1.87
EBP2	YKL172W	TPI1	P00942	248 aa	Known RBP	3.36	□□□□□ -1.87
EBP2	YKL172W	EPT1	P22140	391 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	PMT2	P31382	759 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	MKK1	P32490	508 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	SPS19	P32573	292 aa	Known RBP	3.36	□□□□□ -1.87
EBP2	YKL172W	PCH2	P38126	564 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	ECM34	P38728	170 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	ALP1	P38971	573 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	PRP39	P39682	629 aa	Known RBP	3.36	□□□□□ -1.87
EBP2	YKL172W	YJR054W	P47114	497 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	CDH1	P53197	566 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	SUR7	P54003	302 aa		3.36	□□□□□ -1.87
EBP2	YKL172W	RPS19A	P07280	144 aa	Known RBP	3.35	□□□□□ -1.87
EBP2	YKL172W	RPS19B	P07281	144 aa	Predicted RBP	3.35	□□□□□ -1.87
EBP2	YKL172W	VMA2	P16140	517 aa	Known RBP	3.35	□□□□□ -1.87
EBP2	YKL172W	YKL071W	P36086	256 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	RCK2	P38623	610 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	EFM1	P38732	585 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	STB1	P42845	420 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	FYV8	P46949	817 aa	Known RBP	3.35	□□□□□ -1.87
EBP2	YKL172W	VEL1	P53058	206 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	YGL114W	P53134	725 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	LSG1	P53145	640 aa	Known RBP	3.35	□□□□□ -1.87
EBP2	YKL172W	PGC1	Q08959	321 aa		3.35	□□□□□ -1.87
EBP2	YKL172W	RNR2	P09938	399 aa	Known RBP	3.34	□□□□□ -1.87
EBP2	YKL172W	TPM1	P17536	199 aa	Known RBP	3.34	□□□□□ -1.87
EBP2	YKL172W	UTR1	P21373	530 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	DCC1	P25559	380 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	CIN8	P27895	1000 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	URA10	P30402	227 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	PDC2	P32896	925 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	RMI1	Q02685	241 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	MRX11	Q03079	207 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	RPN8	Q08723	338 aa	Known RBP	3.34	□□□□□ -1.87
EBP2	YKL172W	YOR376W	Q08900	122 aa		3.34	□□□□□ -1.87
EBP2	YKL172W	RAD1	P06777	1100 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	PUT4	P15380	627 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	YER184C	P39961	794 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	YDR286C	Q05530	114 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	PIN3	Q06449	215 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	YDL012C	Q12489	107 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	SPO24	Q3E752	67 aa		3.33	□□□□□ -1.88
EBP2	YKL172W	STE2	D6VTK4	431 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	RBK1	P25332	333 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	MYO3	P36006	1272 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	IML3	P38265	245 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	BTT1	P40314	149 aa	Predicted RBP	3.32	□□□□□ -1.88
EBP2	YKL172W	NAS2	P40555	220 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	MGR3	Q04472	501 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	DDC1	Q08949	612 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	YDR262W	Q12331	272 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	APC2	Q12440	853 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	RAX2	Q12465	1220 aa		3.32	□□□□□ -1.88
EBP2	YKL172W	BGL2	P15703	313 aa	Known RBP	3.31	□□□□□ -1.88
EBP2	YKL172W	MMS21	P38632	267 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	LIN1	P38852	340 aa	Predicted RBP	3.31	□□□□□ -1.88
EBP2	YKL172W	GGC1	P38988	300 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	YCH1	P42937	148 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	SHE4	P51534	789 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	HCH1	P53834	153 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	SED5	Q01590	340 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	IES4	Q08561	116 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	MMT2	Q08970	484 aa		3.31	□□□□□ -1.88
EBP2	YKL172W	RPS14A	P06367	137 aa	Known RBP	3.3	□□□□□ -1.88
EBP2	YKL172W	ZIP1	P31111	875 aa		3.3	□□□□□ -1.88
EBP2	YKL172W	VMA5	P31412	392 aa	Known RBP	3.3	□□□□□ -1.88
EBP2	YKL172W	DTR1	P38125	572 aa		3.3	□□□□□ -1.88
EBP2	YKL172W	SMP1	P38128	452 aa		3.3	□□□□□ -1.88
EBP2	YKL172W	RPS14B	P39516	138 aa	Known RBP	3.3	□□□□□ -1.88
EBP2	YKL172W	COQ5	P49017	307 aa		3.3	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms