RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W YLR352WQ06479 807 aa4.94□□□□□ -1.62
CBF1YJR060W YLL007CQ07799 665 aa4.94□□□□□ -1.62
CBF1YJR060W SNX3Q08826 162 aaKnown RBP4.94□□□□□ -1.62
CBF1YJR060W YOR389WQ08912 624 aa4.94□□□□□ -1.62
CBF1YJR060W YPL278CQ08990 100 aa4.94□□□□□ -1.62
CBF1YJR060W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
CBF1YJR060W RPN6Q12377 434 aa4.94□□□□□ -1.62
CBF1YJR060W YOR019WQ99248 730 aa4.94□□□□□ -1.62
CBF1YJR060W ATP6P00854 259 aa4.93□□□□□ -1.62
CBF1YJR060W CBP2P03874 630 aaPredicted RBP4.93□□□□□ -1.62
CBF1YJR060W YML003WP0CF16 290 aa4.93□□□□□ -1.62
CBF1YJR060W UNG1P12887 359 aa4.93□□□□□ -1.62
CBF1YJR060W CBS1P14066 229 aa4.93□□□□□ -1.62
CBF1YJR060W CCA1P21269 546 aa4.93□□□□□ -1.62
CBF1YJR060W PWP1P21304 576 aaKnown RBP4.93□□□□□ -1.62
CBF1YJR060W CNE1P27825 502 aa4.93□□□□□ -1.62
CBF1YJR060W PMT2P31382 759 aa4.93□□□□□ -1.62
CBF1YJR060W MRPL17P36528 281 aa4.93□□□□□ -1.62
CBF1YJR060W FZO1P38297 855 aa4.93□□□□□ -1.62
CBF1YJR060W JHD2P47156 728 aaPredicted RBP4.93□□□□□ -1.62
CBF1YJR060W TOM22P49334 152 aa4.93□□□□□ -1.62
CBF1YJR060W MIG2P53035 382 aa4.93□□□□□ -1.62
CBF1YJR060W VPS73P53142 486 aaKnown RBP4.93□□□□□ -1.62
CBF1YJR060W NNF2P53253 936 aa4.93□□□□□ -1.62
CBF1YJR060W COG2P53271 262 aa4.93□□□□□ -1.62
CBF1YJR060W INN1P53901 409 aa4.93□□□□□ -1.62
CBF1YJR060W YDR476CQ03362 224 aa4.93□□□□□ -1.62
CBF1YJR060W YET2Q04210 160 aa4.93□□□□□ -1.62
CBF1YJR060W DYN3Q04949 312 aa4.93□□□□□ -1.62
CBF1YJR060W RQC1Q05468 723 aaKnown RBP4.93□□□□□ -1.62
CBF1YJR060W BCP1Q06338 283 aa4.93□□□□□ -1.62
CBF1YJR060W YOL159CQ08300 171 aa4.93□□□□□ -1.62
CBF1YJR060W YPR202WQ08993 238 aa4.93□□□□□ -1.62
CBF1YJR060W TAF3Q12297 353 aa4.93□□□□□ -1.62
CBF1YJR060W URA4P20051 364 aa4.92□□□□□ -1.62
CBF1YJR060W LDB16P25587 256 aa4.92□□□□□ -1.62
CBF1YJR060W NUP2P32499 720 aa4.92□□□□□ -1.62
CBF1YJR060W RPS27AP35997 82 aaKnown RBP4.92□□□□□ -1.62
CBF1YJR060W CAB3P36076 571 aa4.92□□□□□ -1.62
CBF1YJR060W ROT2P38138 954 aa4.92□□□□□ -1.62
CBF1YJR060W STP2P38704 541 aa4.92□□□□□ -1.62
CBF1YJR060W RPS27BP38711 82 aa4.92□□□□□ -1.62
CBF1YJR060W YHR210CP38893 341 aa4.92□□□□□ -1.62
CBF1YJR060W RGI1P40043 161 aaPredicted RBP4.92□□□□□ -1.62
CBF1YJR060W YJL068CP40363 299 aa4.92□□□□□ -1.62
CBF1YJR060W PEX25Q02969 394 aa4.92□□□□□ -1.62
CBF1YJR060W RAD33Q04231 177 aa4.92□□□□□ -1.62
CBF1YJR060W YLR036CQ07986 203 aa4.92□□□□□ -1.62
CBF1YJR060W YOL024WQ08172 172 aa4.92□□□□□ -1.62
CBF1YJR060W MUM3Q08750 479 aa4.92□□□□□ -1.62
CBF1YJR060W REX3Q12090 404 aa4.92□□□□□ -1.62
CBF1YJR060W PRS5Q12265 496 aaKnown RBP4.92□□□□□ -1.62
CBF1YJR060W SNF8Q12483 233 aa4.92□□□□□ -1.62
CBF1YJR060W YKL018C-AQ3E7A7 99 aa4.92□□□□□ -1.62
CBF1YJR060W GCN1P33892 2672 aaKnown RBP4.91□□□□□ -1.62
CBF1YJR060W YBR085C-AO43137 85 aa4.91□□□□□ -1.62
CBF1YJR060W COX1P00401 534 aa4.91□□□□□ -1.62
CBF1YJR060W CUP1-1P0CX80 61 aa4.91□□□□□ -1.62
CBF1YJR060W CUP1-2P0CX81 61 aa4.91□□□□□ -1.62
CBF1YJR060W RPB5P20434 215 aa4.91□□□□□ -1.62
CBF1YJR060W CHA1P25379 360 aaKnown RBP4.91□□□□□ -1.62
CBF1YJR060W POL4P25615 582 aa4.91□□□□□ -1.62
CBF1YJR060W SIN4P32259 974 aa4.91□□□□□ -1.62
CBF1YJR060W ERG3P32353 365 aa4.91□□□□□ -1.62
CBF1YJR060W RPT5P33297 434 aaKnown RBP4.91□□□□□ -1.62
CBF1YJR060W MSN2P33748 704 aa4.91□□□□□ -1.62
CBF1YJR060W VPS51P36116 164 aa4.91□□□□□ -1.62
CBF1YJR060W SCO2P38072 301 aa4.91□□□□□ -1.62
CBF1YJR060W TRR2P38816 342 aa4.91□□□□□ -1.62
CBF1YJR060W MNN9P39107 395 aaKnown RBP4.91□□□□□ -1.62
CBF1YJR060W YIL152WP40455 235 aa4.91□□□□□ -1.62
CBF1YJR060W ICE2P40499 491 aa4.91□□□□□ -1.62
CBF1YJR060W PMT6P42934 759 aa4.91□□□□□ -1.62
CBF1YJR060W PMT4P46971 762 aa4.91□□□□□ -1.62
CBF1YJR060W UBX6P47049 396 aa4.91□□□□□ -1.62
CBF1YJR060W STE24P47154 453 aa4.91□□□□□ -1.62
CBF1YJR060W RPS12P48589 143 aaKnown RBP4.91□□□□□ -1.62
CBF1YJR060W GLO1P50107 326 aa4.91□□□□□ -1.62
CBF1YJR060W RHO4Q00246 291 aa4.91□□□□□ -1.62
CBF1YJR060W MSC1Q03104 513 aa4.91□□□□□ -1.62
CBF1YJR060W YMR310CQ04867 317 aaPredicted RBP4.91□□□□□ -1.62
CBF1YJR060W CRT10Q08226 957 aa4.91□□□□□ -1.62
CBF1YJR060W FDH1Q08911 376 aa4.91□□□□□ -1.62
CBF1YJR060W RTN2Q12443 393 aa4.91□□□□□ -1.62
CBF1YJR060W AAC1P04710 309 aa4.9□□□□□ -1.63
CBF1YJR060W PUT2P07275 575 aa4.9□□□□□ -1.63
CBF1YJR060W PMR1P13586 950 aa4.9□□□□□ -1.63
CBF1YJR060W PDX1P16451 410 aa4.9□□□□□ -1.63
CBF1YJR060W GLK1P17709 500 aaKnown RBP4.9□□□□□ -1.63
CBF1YJR060W MXR2P25566 168 aa4.9□□□□□ -1.63
CBF1YJR060W FAA1P30624 700 aaKnown RBP4.9□□□□□ -1.63
CBF1YJR060W ORC2P32833 620 aa4.9□□□□□ -1.63
CBF1YJR060W AUR1P36107 401 aaPredicted RBP4.9□□□□□ -1.63
CBF1YJR060W TRM5P38793 499 aa4.9□□□□□ -1.63
CBF1YJR060W VPS52P39904 641 aa4.9□□□□□ -1.63
CBF1YJR060W ALG5P40350 334 aa4.9□□□□□ -1.63
CBF1YJR060W HPM1P40481 377 aa4.9□□□□□ -1.63
CBF1YJR060W LYS12P40495 371 aaKnown RBP4.9□□□□□ -1.63
CBF1YJR060W YIL067CP40514 678 aa4.9□□□□□ -1.63
CBF1YJR060W PAC10P48363 199 aa4.9□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms