RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W YPR1Q12458 312 aa1.94□□□□□ -2.1
RPL40AYIL148W PFK27Q12471 397 aaPredicted RBP1.94□□□□□ -2.1
RPL40AYIL148W YIL002W-AQ3E7Z5 69 aa1.94□□□□□ -2.1
RPL40AYIL148W CBP2P03874 630 aaPredicted RBP1.93□□□□□ -2.1
RPL40AYIL148W CTA1P15202 515 aa1.93□□□□□ -2.1
RPL40AYIL148W SAR1P20606 190 aaKnown RBP1.93□□□□□ -2.1
RPL40AYIL148W CMK2P22517 447 aa1.93□□□□□ -2.1
RPL40AYIL148W MIR1P23641 311 aaKnown RBP1.93□□□□□ -2.1
RPL40AYIL148W URA10P30402 227 aa1.93□□□□□ -2.1
RPL40AYIL148W ACB1P31787 87 aa1.93□□□□□ -2.1
RPL40AYIL148W MEI5P32489 222 aa1.93□□□□□ -2.1
RPL40AYIL148W MKK1P32490 508 aa1.93□□□□□ -2.1
RPL40AYIL148W SUR1P33300 382 aa1.93□□□□□ -2.1
RPL40AYIL148W IST2P38250 946 aa1.93□□□□□ -2.1
RPL40AYIL148W LIN1P38852 340 aaPredicted RBP1.93□□□□□ -2.1
RPL40AYIL148W ATG7P38862 630 aa1.93□□□□□ -2.1
RPL40AYIL148W TIM17P39515 158 aa1.93□□□□□ -2.1
RPL40AYIL148W UTP25P40498 721 aaKnown RBP1.93□□□□□ -2.1
RPL40AYIL148W AIM23P47015 356 aa1.93□□□□□ -2.1
RPL40AYIL148W TAF6P53040 516 aa1.93□□□□□ -2.1
RPL40AYIL148W VOA1P53262 265 aa1.93□□□□□ -2.1
RPL40AYIL148W RNH201P53942 307 aa1.93□□□□□ -2.1
RPL40AYIL148W ENT5Q03769 411 aaKnown RBP1.93□□□□□ -2.1
RPL40AYIL148W MFG1Q07684 458 aa1.93□□□□□ -2.1
RPL40AYIL148W SFM1Q12314 213 aa1.93□□□□□ -2.1
RPL40AYIL148W RPL21BQ12672 160 aaKnown RBP1.93□□□□□ -2.1
RPL40AYIL148W PSK1P31374 1356 aa1.93□□□□□ -2.1
RPL40AYIL148W COX4P04037 155 aa1.92□□□□□ -2.1
RPL40AYIL148W PRB1P09232 635 aa1.92□□□□□ -2.1
RPL40AYIL148W RPL18AP0CX49 186 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W RPL18BP0CX50 186 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W RPS16AP0CX51 143 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W RPS16BP0CX52 143 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W FAR1P21268 830 aa1.92□□□□□ -2.1
RPL40AYIL148W UTR1P21373 530 aa1.92□□□□□ -2.1
RPL40AYIL148W PCL1P24867 279 aa1.92□□□□□ -2.1
RPL40AYIL148W DAL80P26343 269 aa1.92□□□□□ -2.1
RPL40AYIL148W ERG9P29704 444 aa1.92□□□□□ -2.1
RPL40AYIL148W ZUO1P32527 433 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W KTI12P34253 313 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W ANR2P36090 516 aaPredicted RBP1.92□□□□□ -2.1
RPL40AYIL148W SWC5P38326 303 aa1.92□□□□□ -2.1
RPL40AYIL148W BAT1P38891 393 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W PTI1P39927 425 aaPredicted RBP1.92□□□□□ -2.1
RPL40AYIL148W MOB2P43563 287 aa1.92□□□□□ -2.1
RPL40AYIL148W CTK3P46963 296 aaPredicted RBP1.92□□□□□ -2.1
RPL40AYIL148W PRP38Q00723 242 aaPredicted RBP1.92□□□□□ -2.1
RPL40AYIL148W CAB5Q03941 241 aa1.92□□□□□ -2.1
RPL40AYIL148W YDR115WQ04598 105 aa1.92□□□□□ -2.1
RPL40AYIL148W CSM3Q04659 317 aa1.92□□□□□ -2.1
RPL40AYIL148W MHR1Q06630 226 aa1.92□□□□□ -2.1
RPL40AYIL148W DDC1Q08949 612 aa1.92□□□□□ -2.1
RPL40AYIL148W SAM4Q08985 325 aaKnown RBP1.92□□□□□ -2.1
RPL40AYIL148W ATP16Q12165 160 aa1.92□□□□□ -2.1
RPL40AYIL148W VPS63O13549 108 aa1.91□□□□□ -2.1
RPL40AYIL148W RAD7P06779 565 aa1.91□□□□□ -2.1
RPL40AYIL148W DCC1P25559 380 aa1.91□□□□□ -2.1
RPL40AYIL148W YPS1P32329 569 aa1.91□□□□□ -2.1
RPL40AYIL148W HXT1P32465 570 aa1.91□□□□□ -2.1
RPL40AYIL148W PEX32P38292 413 aa1.91□□□□□ -2.1
RPL40AYIL148W TDA11P38854 504 aa1.91□□□□□ -2.1
RPL40AYIL148W MNN9P39107 395 aaKnown RBP1.91□□□□□ -2.1
RPL40AYIL148W PCL7P40186 285 aa1.91□□□□□ -2.1
RPL40AYIL148W AIM20P40451 204 aa1.91□□□□□ -2.1
RPL40AYIL148W STB1P42845 420 aa1.91□□□□□ -2.1
RPL40AYIL148W NAS6P50086 228 aa1.91□□□□□ -2.1
RPL40AYIL148W YGL262WP53054 175 aa1.91□□□□□ -2.1
RPL40AYIL148W PXR1P53335 271 aaPredicted RBP1.91□□□□□ -2.1
RPL40AYIL148W NRM1P53718 249 aa1.91□□□□□ -2.1
RPL40AYIL148W TRM82Q03774 444 aa1.91□□□□□ -2.1
RPL40AYIL148W VPS20Q04272 221 aa1.91□□□□□ -2.1
RPL40AYIL148W YHC1Q05900 231 aaKnown RBP1.91□□□□□ -2.1
RPL40AYIL148W YLR177WQ06251 628 aa1.91□□□□□ -2.1
RPL40AYIL148W SRO7Q12038 1033 aa1.91□□□□□ -2.1
RPL40AYIL148W RAD1P06777 1100 aa1.9□□□□□ -2.11
RPL40AYIL148W UNG1P12887 359 aa1.9□□□□□ -2.11
RPL40AYIL148W ERD1P16151 362 aa1.9□□□□□ -2.11
RPL40AYIL148W ZRT1P32804 376 aa1.9□□□□□ -2.11
RPL40AYIL148W RPS0AP32905 252 aaKnown RBP1.9□□□□□ -2.11
RPL40AYIL148W EBP2P36049 427 aaKnown RBP1.9□□□□□ -2.11
RPL40AYIL148W UTH1P36135 365 aa1.9□□□□□ -2.11
RPL40AYIL148W MMS21P38632 267 aa1.9□□□□□ -2.11
RPL40AYIL148W LOH1P47055 219 aa1.9□□□□□ -2.11
RPL40AYIL148W BIO3P50277 480 aa1.9□□□□□ -2.11
RPL40AYIL148W VEL1P53058 206 aa1.9□□□□□ -2.11
RPL40AYIL148W CDH1P53197 566 aa1.9□□□□□ -2.11
RPL40AYIL148W YLR152CP54072 576 aa1.9□□□□□ -2.11
RPL40AYIL148W MRPS16Q02608 121 aa1.9□□□□□ -2.11
RPL40AYIL148W IRC4Q03036 179 aa1.9□□□□□ -2.11
RPL40AYIL148W ADD37Q03233 198 aa1.9□□□□□ -2.11
RPL40AYIL148W ABZ2Q03266 374 aa1.9□□□□□ -2.11
RPL40AYIL148W DTD1Q07648 150 aaKnown RBP1.9□□□□□ -2.11
RPL40AYIL148W FRE8Q12209 686 aa1.9□□□□□ -2.11
RPL40AYIL148W MHP1P43638 1398 aa1.89□□□□□ -2.11
RPL40AYIL148W STE2D6VTK4 431 aa1.89□□□□□ -2.11
RPL40AYIL148W RPC40P07703 335 aaKnown RBP1.89□□□□□ -2.11
RPL40AYIL148W GAL7P08431 366 aa1.89□□□□□ -2.11
RPL40AYIL148W BGL2P15703 313 aaKnown RBP1.89□□□□□ -2.11
RPL40AYIL148W HSP26P15992 214 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
RPL40AYIL148W EPT1P22140 391 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms