RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W SUA5P32579 426 aa2.33□□□□□ -2.04
TRA1YHR099W SHP1P34223 423 aa2.33□□□□□ -2.04
TRA1YHR099W FAU1P40099 211 aa2.33□□□□□ -2.04
TRA1YHR099W AZF1P41696 914 aa2.33□□□□□ -2.04
TRA1YHR099W YDR042CQ03205 200 aa2.33□□□□□ -2.04
TRA1YHR099W PRM6Q04705 352 aa2.33□□□□□ -2.04
TRA1YHR099W YLR271WQ06152 274 aa2.33□□□□□ -2.04
TRA1YHR099W GAS5Q08193 484 aa2.33□□□□□ -2.04
TRA1YHR099W INP54Q08227 384 aaKnown RBP2.33□□□□□ -2.04
TRA1YHR099W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
TRA1YHR099W ENA1P13587 1091 aa2.33□□□□□ -2.04
TRA1YHR099W MSN1P22148 382 aa2.33□□□□□ -2.04
TRA1YHR099W CHL1P22516 861 aaPredicted RBP2.33□□□□□ -2.04
TRA1YHR099W AXL2P38928 823 aa2.33□□□□□ -2.04
TRA1YHR099W MIT1P40002 666 aa2.33□□□□□ -2.04
TRA1YHR099W ALG8P40351 577 aa2.33□□□□□ -2.04
TRA1YHR099W CDC40P40968 455 aaPredicted RBP2.33□□□□□ -2.04
TRA1YHR099W YJR124CP47159 448 aa2.33□□□□□ -2.04
TRA1YHR099W YGR067CP53243 804 aa2.33□□□□□ -2.04
TRA1YHR099W HOL1P53389 586 aa2.33□□□□□ -2.04
TRA1YHR099W CUZ1P53899 274 aa2.33□□□□□ -2.04
TRA1YHR099W ENA2Q01896 1091 aa2.33□□□□□ -2.04
TRA1YHR099W KIN4Q01919 800 aa2.33□□□□□ -2.04
TRA1YHR099W VBA1Q04301 562 aa2.33□□□□□ -2.04
TRA1YHR099W INM2Q05533 292 aa2.33□□□□□ -2.04
TRA1YHR099W MAM3Q12296 706 aa2.33□□□□□ -2.04
TRA1YHR099W PRP46Q12417 451 aaPredicted RBP2.33□□□□□ -2.04
TRA1YHR099W ENA5Q12691 1091 aa2.33□□□□□ -2.04
TRA1YHR099W AI5_ALPHAQ9ZZX1 630 aa2.33□□□□□ -2.04
TRA1YHR099W RPL4AP10664 362 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W THI80P35202 319 aa2.32□□□□□ -2.04
TRA1YHR099W YPT53P36019 220 aa2.32□□□□□ -2.04
TRA1YHR099W GCV3P39726 170 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W KTR7P40504 517 aa2.32□□□□□ -2.04
TRA1YHR099W YAE1P47118 141 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W RPL4BP49626 362 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W YDR249CQ03787 373 aa2.32□□□□□ -2.04
TRA1YHR099W SDH7Q04401 133 aa2.32□□□□□ -2.04
TRA1YHR099W EMI2Q04409 500 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W UIP4Q08926 304 aa2.32□□□□□ -2.04
TRA1YHR099W INP53Q12271 1107 aa2.32□□□□□ -2.04
TRA1YHR099W ISY1P21374 235 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W VAC17P25591 423 aa2.32□□□□□ -2.04
TRA1YHR099W MSK1P32048 576 aa2.32□□□□□ -2.04
TRA1YHR099W MEP1P40260 492 aa2.32□□□□□ -2.04
TRA1YHR099W MIC26P50087 233 aa2.32□□□□□ -2.04
TRA1YHR099W NBP1P52919 319 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W YPL107WQ02873 248 aa2.32□□□□□ -2.04
TRA1YHR099W MSC1Q03104 513 aa2.32□□□□□ -2.04
TRA1YHR099W YLR224WQ05947 369 aa2.32□□□□□ -2.04
TRA1YHR099W DXO1Q06349 442 aa2.32□□□□□ -2.04
TRA1YHR099W YDL121CQ07541 149 aa2.32□□□□□ -2.04
TRA1YHR099W RRS1Q08746 203 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W FCY22Q12119 530 aa2.32□□□□□ -2.04
TRA1YHR099W RPL27AP0C2H6 136 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W RPL27BP0C2H7 136 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W UNG1P12887 359 aa2.32□□□□□ -2.04
TRA1YHR099W SAR1P20606 190 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W NRP1P32770 719 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
TRA1YHR099W YSC83P32792 385 aa2.32□□□□□ -2.04
TRA1YHR099W TKL2P33315 681 aa2.32□□□□□ -2.04
TRA1YHR099W YNK1P36010 153 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W SCO2P38072 301 aa2.32□□□□□ -2.04
TRA1YHR099W YBR139WP38109 508 aa2.32□□□□□ -2.04
TRA1YHR099W UBP14P38237 781 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W DBP8P38719 431 aa2.32□□□□□ -2.04
TRA1YHR099W ASN2P49090 572 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W BOP3P53958 396 aa2.32□□□□□ -2.04
TRA1YHR099W BNA7Q04066 261 aa2.32□□□□□ -2.04
TRA1YHR099W GIS4Q04233 774 aa2.32□□□□□ -2.04
TRA1YHR099W ARO10Q06408 635 aa2.32□□□□□ -2.04
TRA1YHR099W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
TRA1YHR099W ERD1P16151 362 aa2.32□□□□□ -2.04
TRA1YHR099W TRX1P22217 103 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W PDC6P26263 563 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W GMH1P36125 273 aa2.32□□□□□ -2.04
TRA1YHR099W PGM2P37012 569 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W PFF1P38244 976 aa2.32□□□□□ -2.04
TRA1YHR099W VBA2P38358 474 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W VPS29P38759 282 aa2.32□□□□□ -2.04
TRA1YHR099W SMF2P38778 549 aa2.32□□□□□ -2.04
TRA1YHR099W JLP2P40206 208 aa2.32□□□□□ -2.04
TRA1YHR099W PAN6P40459 309 aa2.32□□□□□ -2.04
TRA1YHR099W ARP3P47117 449 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W ARO8P53090 500 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W YGR035CP53222 116 aa2.32□□□□□ -2.04
TRA1YHR099W CTK1Q03957 528 aaKnown RBP2.32□□□□□ -2.04
TRA1YHR099W HSP31Q04432 237 aa2.32□□□□□ -2.04
TRA1YHR099W ECM22Q05958 814 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W RRD2Q12461 358 aa2.32□□□□□ -2.04
TRA1YHR099W YDR461C-AQ2V2P7 80 aa2.32□□□□□ -2.04
TRA1YHR099W HBN1Q96VH4 193 aa2.32□□□□□ -2.04
TRA1YHR099W IMG2P25642 146 aaPredicted RBP2.32□□□□□ -2.04
TRA1YHR099W RGT1P32862 1170 aa2.32□□□□□ -2.04
TRA1YHR099W REC104P33323 182 aa2.32□□□□□ -2.04
TRA1YHR099W GPX2P38143 162 aa2.32□□□□□ -2.04
TRA1YHR099W AME1P38313 324 aa2.32□□□□□ -2.04
TRA1YHR099W LEU5P38702 357 aa2.32□□□□□ -2.04
TRA1YHR099W YER184CP39961 794 aa2.32□□□□□ -2.04
TRA1YHR099W PAM16P42949 149 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms