RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W MSS11Q03825 758 aa3.47□□□□□ -1.85
SPT6YGR116W YMR315WQ04869 349 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W HDA2Q06629 674 aa3.47□□□□□ -1.85
SPT6YGR116W THI73Q07904 523 aa3.47□□□□□ -1.85
SPT6YGR116W YDL176WQ12027 708 aa3.47□□□□□ -1.85
SPT6YGR116W FCF2Q12035 217 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W YPL066WQ12194 479 aa3.47□□□□□ -1.85
SPT6YGR116W TIR4Q12218 487 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W HBN1Q96VH4 193 aa3.47□□□□□ -1.85
SPT6YGR116W HRP1Q99383 534 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W NAM2P11325 894 aa3.47□□□□□ -1.85
SPT6YGR116W MAS2P11914 482 aa3.47□□□□□ -1.85
SPT6YGR116W MRP20P32387 263 aa3.47□□□□□ -1.85
SPT6YGR116W SSS1P35179 80 aa3.47□□□□□ -1.85
SPT6YGR116W KSP1P38691 1029 aaKnown RBP3.47□□□□□ -1.85
SPT6YGR116W HRB1P38922 454 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SPT6YGR116W GTS1P40956 396 aa3.47□□□□□ -1.85
SPT6YGR116W NSE4P43124 402 aa3.47□□□□□ -1.85
SPT6YGR116W YJL043WP47053 257 aa3.47□□□□□ -1.85
SPT6YGR116W MTL1P53214 551 aa3.47□□□□□ -1.85
SPT6YGR116W ODC1Q03028 310 aa3.47□□□□□ -1.85
SPT6YGR116W NOC4Q06512 552 aaPredicted RBP3.47□□□□□ -1.85
SPT6YGR116W GUP2Q08929 609 aa3.47□□□□□ -1.85
SPT6YGR116W NDJ1Q12366 352 aa3.47□□□□□ -1.85
SPT6YGR116W LAA1P39526 2014 aa3.46□□□□□ -1.85
SPT6YGR116W REV1P12689 985 aa3.46□□□□□ -1.86
SPT6YGR116W RPA135P22138 1203 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W IFM1P25038 676 aa3.46□□□□□ -1.86
SPT6YGR116W SFC1P33303 322 aa3.46□□□□□ -1.86
SPT6YGR116W THI80P35202 319 aa3.46□□□□□ -1.86
SPT6YGR116W FLR1P38124 548 aa3.46□□□□□ -1.86
SPT6YGR116W YHR122WP38829 231 aa3.46□□□□□ -1.86
SPT6YGR116W SLM1P40485 686 aa3.46□□□□□ -1.86
SPT6YGR116W MET28P40573 187 aa3.46□□□□□ -1.86
SPT6YGR116W GNA1P43577 159 aaPredicted RBP3.46□□□□□ -1.86
SPT6YGR116W IDS2P46958 469 aa3.46□□□□□ -1.86
SPT6YGR116W TAD2P47058 250 aa3.46□□□□□ -1.86
SPT6YGR116W AIM14P53109 570 aa3.46□□□□□ -1.86
SPT6YGR116W YGR117CP53270 476 aa3.46□□□□□ -1.86
SPT6YGR116W KIN4Q01919 800 aa3.46□□□□□ -1.86
SPT6YGR116W CAC2Q04199 468 aa3.46□□□□□ -1.86
SPT6YGR116W YMR321CQ04898 105 aa3.46□□□□□ -1.86
SPT6YGR116W MRPL44P19956 98 aa3.46□□□□□ -1.86
SPT6YGR116W SEC59P20048 519 aa3.46□□□□□ -1.86
SPT6YGR116W PRP18P33411 251 aaPredicted RBP3.46□□□□□ -1.86
SPT6YGR116W ECT1P33412 323 aa3.46□□□□□ -1.86
SPT6YGR116W MTH1P35198 433 aa3.46□□□□□ -1.86
SPT6YGR116W HXT5P38695 592 aa3.46□□□□□ -1.86
SPT6YGR116W ASP1P38986 381 aaPredicted RBP3.46□□□□□ -1.86
SPT6YGR116W YIL165CP40446 119 aa3.46□□□□□ -1.86
SPT6YGR116W PRM10P42946 383 aa3.46□□□□□ -1.86
SPT6YGR116W QRI1P43123 477 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W FAA4P47912 694 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W COG7P53195 279 aa3.46□□□□□ -1.86
SPT6YGR116W PAU12P53343 120 aa3.46□□□□□ -1.86
SPT6YGR116W NAM8Q00539 523 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W VBA4Q04602 768 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W MRPL35Q06678 367 aa3.46□□□□□ -1.86
SPT6YGR116W YPR011CQ12251 326 aa3.46□□□□□ -1.86
SPT6YGR116W YCP4P25349 247 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W DBF20P32328 564 aa3.46□□□□□ -1.86
SPT6YGR116W SFP1P32432 683 aa3.46□□□□□ -1.86
SPT6YGR116W MAP2P38174 421 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W HSE1P38753 452 aa3.46□□□□□ -1.86
SPT6YGR116W YIR035CP40579 254 aa3.46□□□□□ -1.86
SPT6YGR116W HXT14P42833 540 aa3.46□□□□□ -1.86
SPT6YGR116W TIS11P47977 285 aa3.46□□□□□ -1.86
SPT6YGR116W RCR2Q03446 210 aaKnown RBP3.46□□□□□ -1.86
SPT6YGR116W ARR2Q06597 130 aa3.46□□□□□ -1.86
SPT6YGR116W SPC3Q12133 184 aa3.46□□□□□ -1.86
SPT6YGR116W EAF3Q12432 401 aa3.46□□□□□ -1.86
SPT6YGR116W MHT1Q12525 324 aa3.46□□□□□ -1.86
SPT6YGR116W CDC21P06785 304 aa3.45□□□□□ -1.86
SPT6YGR116W YFR010W-AP0C5N0 62 aa3.45□□□□□ -1.86
SPT6YGR116W PRE4P30657 266 aa3.45□□□□□ -1.86
SPT6YGR116W MSK1P32048 576 aa3.45□□□□□ -1.86
SPT6YGR116W SRY1P36007 326 aa3.45□□□□□ -1.86
SPT6YGR116W EDS1P38073 919 aa3.45□□□□□ -1.86
SPT6YGR116W YBR071WP38243 211 aa3.45□□□□□ -1.86
SPT6YGR116W RTS2P40962 232 aa3.45□□□□□ -1.86
SPT6YGR116W DUG1P43616 481 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W OCA1P50946 238 aaPredicted RBP3.45□□□□□ -1.86
SPT6YGR116W MDM34P53083 459 aa3.45□□□□□ -1.86
SPT6YGR116W PBP1P53297 722 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W TY1A-MR1Q04215 440 aa3.45□□□□□ -1.86
SPT6YGR116W PLM2Q04383 521 aa3.45□□□□□ -1.86
SPT6YGR116W FIT1Q04433 528 aa3.45□□□□□ -1.86
SPT6YGR116W YDL086WQ07505 273 aa3.45□□□□□ -1.86
SPT6YGR116W ESC8Q08119 714 aa3.45□□□□□ -1.86
SPT6YGR116W ATG41Q12048 136 aa3.45□□□□□ -1.86
SPT6YGR116W UPC2Q12151 913 aa3.45□□□□□ -1.86
SPT6YGR116W TY1A-BLQ12266 440 aa3.45□□□□□ -1.86
SPT6YGR116W YCL001W-BQ96VH2 84 aa3.45□□□□□ -1.86
SPT6YGR116W YPR096CO13587 100 aa3.45□□□□□ -1.86
SPT6YGR116W RPL25P04456 142 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W SST2P11972 698 aaKnown RBP3.45□□□□□ -1.86
SPT6YGR116W YCL002CP25565 263 aa3.45□□□□□ -1.86
SPT6YGR116W DOA4P32571 926 aa3.45□□□□□ -1.86
SPT6YGR116W DSS4P32601 143 aa3.45□□□□□ -1.86
SPT6YGR116W PAU24P38155 120 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms