RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W FSH3Q99369 266 aa0.99□□□□□ -2.25
CUL3YGR003W UBA1P22515 1024 aaKnown RBP0.99□□□□□ -2.25
CUL3YGR003W RPB9P27999 122 aa0.99□□□□□ -2.25
CUL3YGR003W LDS1P31379 325 aa0.99□□□□□ -2.25
CUL3YGR003W MKK1P32490 508 aa0.99□□□□□ -2.25
CUL3YGR003W RXT2P38255 430 aa0.99□□□□□ -2.25
CUL3YGR003W SHE3P38272 425 aaKnown RBP0.99□□□□□ -2.25
CUL3YGR003W LSG1P53145 640 aaKnown RBP0.99□□□□□ -2.25
CUL3YGR003W TPC1P53257 314 aa0.99□□□□□ -2.25
CUL3YGR003W YNR068CP53754 272 aa0.99□□□□□ -2.25
CUL3YGR003W NAT4Q04751 285 aa0.99□□□□□ -2.25
CUL3YGR003W GAS2Q06135 555 aa0.99□□□□□ -2.25
CUL3YGR003W YFH1Q07540 174 aa0.99□□□□□ -2.25
CUL3YGR003W PEX27Q08580 376 aa0.99□□□□□ -2.25
CUL3YGR003W DDC1Q08949 612 aa0.99□□□□□ -2.25
CUL3YGR003W FRE6Q12473 712 aa0.99□□□□□ -2.25
CUL3YGR003W RAD1P06777 1100 aa0.98□□□□□ -2.25
CUL3YGR003W FUS3P16892 353 aaKnown RBP0.98□□□□□ -2.25
CUL3YGR003W EPT1P22140 391 aa0.98□□□□□ -2.25
CUL3YGR003W MRPL8P22353 238 aa0.98□□□□□ -2.25
CUL3YGR003W SPS19P32573 292 aaKnown RBP0.98□□□□□ -2.25
CUL3YGR003W IST2P38250 946 aa0.98□□□□□ -2.25
CUL3YGR003W ECM34P38728 170 aa0.98□□□□□ -2.25
CUL3YGR003W FRT2P39734 528 aa0.98□□□□□ -2.25
CUL3YGR003W MPS2P53159 387 aa0.98□□□□□ -2.25
CUL3YGR003W SED5Q01590 340 aa0.98□□□□□ -2.25
CUL3YGR003W PML1Q07930 204 aaPredicted RBP0.98□□□□□ -2.25
CUL3YGR003W MMT2Q08970 484 aa0.98□□□□□ -2.25
CUL3YGR003W YDL211CQ12121 372 aa0.98□□□□□ -2.25
CUL3YGR003W STE3P06783 470 aa0.97□□□□□ -2.25
CUL3YGR003W ASP3-2P0CX77 362 aa0.97□□□□□ -2.25
CUL3YGR003W ASP3-3P0CX78 362 aa0.97□□□□□ -2.25
CUL3YGR003W ASP3-4P0CX79 362 aa0.97□□□□□ -2.25
CUL3YGR003W ASP3-1P0CZ17 362 aa0.97□□□□□ -2.25
CUL3YGR003W SAG1P20840 650 aa0.97□□□□□ -2.25
CUL3YGR003W MXR2P25566 168 aa0.97□□□□□ -2.25
CUL3YGR003W POT1P27796 417 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
CUL3YGR003W PUP2P32379 260 aa0.97□□□□□ -2.25
CUL3YGR003W MRPS5P33759 307 aa0.97□□□□□ -2.25
CUL3YGR003W TIP20P33891 701 aa0.97□□□□□ -2.25
CUL3YGR003W COS9P36034 407 aa0.97□□□□□ -2.25
CUL3YGR003W YKR015CP36111 568 aa0.97□□□□□ -2.25
CUL3YGR003W BDH1P39714 382 aa0.97□□□□□ -2.25
CUL3YGR003W SNL1P40548 159 aa0.97□□□□□ -2.25
CUL3YGR003W MOB2P43563 287 aa0.97□□□□□ -2.25
CUL3YGR003W ZRG17P53735 605 aa0.97□□□□□ -2.25
CUL3YGR003W PRM1P53835 661 aa0.97□□□□□ -2.25
CUL3YGR003W ECM19Q06011 112 aa0.97□□□□□ -2.25
CUL3YGR003W HMS1Q12398 434 aa0.97□□□□□ -2.25
CUL3YGR003W UBA3Q99344 299 aa0.97□□□□□ -2.25
CUL3YGR003W RPS23AP0CX29 145 aaKnown RBP0.97□□□□□ -2.25
CUL3YGR003W RPS23BP0CX30 145 aa0.97□□□□□ -2.25
CUL3YGR003W IME2P32581 645 aa0.97□□□□□ -2.25
CUL3YGR003W TAE1P38340 232 aa0.97□□□□□ -2.25
CUL3YGR003W TRR2P38816 342 aa0.97□□□□□ -2.25
CUL3YGR003W GGC1P38988 300 aa0.97□□□□□ -2.25
CUL3YGR003W RRG9P40156 214 aa0.97□□□□□ -2.25
CUL3YGR003W RPN14P53196 417 aa0.97□□□□□ -2.25
CUL3YGR003W YNL143CP53908 130 aa0.97□□□□□ -2.25
CUL3YGR003W VPS9P54787 451 aa0.97□□□□□ -2.25
CUL3YGR003W MIM1Q08176 113 aa0.97□□□□□ -2.25
CUL3YGR003W ALE1Q08548 619 aa0.97□□□□□ -2.25
CUL3YGR003W IML3P38265 245 aa0.96□□□□□ -2.26
CUL3YGR003W YMR262WP38430 313 aa0.96□□□□□ -2.26
CUL3YGR003W SPO73P40031 143 aa0.96□□□□□ -2.26
CUL3YGR003W JEM1P40358 645 aa0.96□□□□□ -2.26
CUL3YGR003W COS4P43542 379 aa0.96□□□□□ -2.26
CUL3YGR003W TFB5Q3E7C1 72 aaPredicted RBP0.96□□□□□ -2.26
CUL3YGR003W MAS1P10507 462 aa0.96□□□□□ -2.26
CUL3YGR003W BGL2P15703 313 aaKnown RBP0.96□□□□□ -2.26
CUL3YGR003W EFB1P32471 206 aaKnown RBP0.96□□□□□ -2.26
CUL3YGR003W SRB2P34162 210 aa0.96□□□□□ -2.26
CUL3YGR003W SMF2P38778 549 aa0.96□□□□□ -2.26
CUL3YGR003W YHR122WP38829 231 aa0.96□□□□□ -2.26
CUL3YGR003W YHR182WP38870 785 aa0.96□□□□□ -2.26
CUL3YGR003W UFE1P41834 346 aa0.96□□□□□ -2.26
CUL3YGR003W YFR018CP43599 363 aa0.96□□□□□ -2.26
CUL3YGR003W YHC3P47040 408 aa0.96□□□□□ -2.26
CUL3YGR003W GTO3Q04806 366 aa0.96□□□□□ -2.26
CUL3YGR003W HRT1Q08273 121 aa0.96□□□□□ -2.26
CUL3YGR003W NFI1Q12216 726 aa0.96□□□□□ -2.26
CUL3YGR003W LDB17Q12342 491 aa0.96□□□□□ -2.26
CUL3YGR003W SKS1Q12505 502 aa0.96□□□□□ -2.26
CUL3YGR003W HXT2P23585 541 aa0.95□□□□□ -2.26
CUL3YGR003W AST1P35183 429 aa0.95□□□□□ -2.26
CUL3YGR003W SMD1Q02260 146 aaPredicted RBP0.95□□□□□ -2.26
CUL3YGR003W YMR010WQ03687 405 aa0.95□□□□□ -2.26
CUL3YGR003W INP1Q03694 420 aa0.95□□□□□ -2.26
CUL3YGR003W INP2Q03824 705 aa0.95□□□□□ -2.26
CUL3YGR003W YDR222WQ04925 415 aa0.95□□□□□ -2.26
CUL3YGR003W MRX8Q05473 314 aa0.95□□□□□ -2.26
CUL3YGR003W FAR10Q06001 478 aa0.95□□□□□ -2.26
CUL3YGR003W SPS100P13130 326 aa0.95□□□□□ -2.26
CUL3YGR003W RDS1P25611 832 aa0.95□□□□□ -2.26
CUL3YGR003W SKG6P32900 734 aaPredicted RBP0.95□□□□□ -2.26
CUL3YGR003W ZRT3P34240 503 aa0.95□□□□□ -2.26
CUL3YGR003W LAS1P36146 502 aaPredicted RBP0.95□□□□□ -2.26
CUL3YGR003W RBG1P39729 369 aa0.95□□□□□ -2.26
CUL3YGR003W YIL089WP40500 205 aa0.95□□□□□ -2.26
CUL3YGR003W NAS6P50086 228 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms