RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	FLP1	P03870	423 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	ARF1	P11076	181 aa	Known RBP	4.99	□□□□□ -1.61
SHE10	YGL228W	NCP1	P16603	691 aa	Known RBP	4.99	□□□□□ -1.61
SHE10	YGL228W	YPK2	P18961	677 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	IDP1	P21954	428 aa	Known RBP	4.99	□□□□□ -1.61
SHE10	YGL228W	RPS5	P26783	225 aa	Known RBP	4.99	□□□□□ -1.61
SHE10	YGL228W	NDC1	P32500	655 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	TIM12	P32830	109 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	DHR2	P36009	735 aa	Predicted RBP	4.99	□□□□□ -1.61
SHE10	YGL228W	MRPL16	P38064	232 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	UBS1	P38290	277 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	CUP9	P41817	306 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	MDV1	P47025	714 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	NUP49	Q02199	472 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	OST6	Q03723	332 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	SEC13	Q04491	297 aa	Known RBP	4.99	□□□□□ -1.61
SHE10	YGL228W	ARP10	Q04549	284 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	DFG5	Q05031	458 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	VID22	Q05934	901 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	FMP45	Q07651	309 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	YDL007C-A	Q2V2Q0	85 aa		4.99	□□□□□ -1.61
SHE10	YGL228W	NAR1	P23503	491 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	RPL5	P26321	297 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	BAP2	P38084	609 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	RPS20	P38701	121 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	ARN2	P38724	620 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	SKN7	P38889	622 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	TIF11	P38912	153 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	AIM10	P39965	576 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	SHR5	P41912	237 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	STB1	P42845	420 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	YGL235W	P53071	178 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	LSG1	P53145	640 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	YNR062C	P53748	327 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	EKI1	Q03764	534 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	YMR087W	Q04299	284 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	PLM2	Q04383	521 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	ERB1	Q04660	807 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	RNH1	Q04740	348 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	MCM21	Q06675	368 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	SYO1	Q07395	620 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	NOP12	Q08208	459 aa	Known RBP	4.98	□□□□□ -1.61
SHE10	YGL228W	AKR2	Q12013	749 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	REX3	Q12090	404 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	TAD3	Q9URQ3	322 aa		4.98	□□□□□ -1.61
SHE10	YGL228W	DPM1	P14020	267 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	DPB2	P24482	689 aa	Predicted RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	SBA1	P28707	216 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	PRE2	P30656	287 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	SEF1	P34228	1148 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	LST4	P34239	828 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	MTC4	P38335	694 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	RPP1	P38786	293 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	CHL4	P38907	458 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	IRC7	P43623	340 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	SSY5	P47002	699 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	ATG21	Q02887	496 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	MAK3	Q03503	176 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	DML1	Q03652	475 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	MDM30	Q05930	598 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	AVO1	Q08236	1176 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	YOR376W	Q08900	122 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	RBD2	Q12270	262 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	HER1	Q12276	1246 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	IES3	Q12345	250 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	PNS1	Q12412	539 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	RAS1	P01119	309 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	YPT1	P01123	206 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	PRP28	P23394	588 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	HSP30	P25619	332 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	SNC1	P31109	117 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	YEF1	P32622	495 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	JEN1	P36035	616 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	MDM31	P38880	579 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
SHE10	YGL228W	YIL166C	P40445	542 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	HXT9	P40885	567 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	OCA1	P50946	238 aa	Predicted RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	NQM1	P53228	333 aa	Predicted RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	BUD17	P53727	317 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	PGA1	P53896	198 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	HXT11	P54862	567 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	FIN1	Q03898	291 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	SNO4	Q04902	237 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	FMP42	Q04991	504 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	RSA3	Q05942	220 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	SNT309	Q06091	175 aa	Predicted RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	YPR127W	Q06494	345 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	YLR040C	Q07988	224 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	ENB1	Q08299	606 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	HSP33	Q08914	237 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	YPL191C	Q08930	360 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	HSP32	Q08992	237 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	BTS1	Q12051	335 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	YDL177C	Q12257	170 aa		4.97	□□□□□ -1.61
SHE10	YGL228W	PAR32	Q12515	295 aa	Known RBP	4.97	□□□□□ -1.61
SHE10	YGL228W	TOR1	P35169	2470 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
SHE10	YGL228W	YCL002C	P25565	263 aa		4.96	□□□□□ -1.62
SHE10	YGL228W	ARO7	P32178	256 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms