RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W FLP1P03870 423 aa4.99□□□□□ -1.61
SHE10YGL228W ARF1P11076 181 aaKnown RBP4.99□□□□□ -1.61
SHE10YGL228W NCP1P16603 691 aaKnown RBP4.99□□□□□ -1.61
SHE10YGL228W YPK2P18961 677 aa4.99□□□□□ -1.61
SHE10YGL228W IDP1P21954 428 aaKnown RBP4.99□□□□□ -1.61
SHE10YGL228W RPS5P26783 225 aaKnown RBP4.99□□□□□ -1.61
SHE10YGL228W NDC1P32500 655 aa4.99□□□□□ -1.61
SHE10YGL228W TIM12P32830 109 aa4.99□□□□□ -1.61
SHE10YGL228W DHR2P36009 735 aaPredicted RBP4.99□□□□□ -1.61
SHE10YGL228W MRPL16P38064 232 aa4.99□□□□□ -1.61
SHE10YGL228W UBS1P38290 277 aa4.99□□□□□ -1.61
SHE10YGL228W CUP9P41817 306 aa4.99□□□□□ -1.61
SHE10YGL228W MDV1P47025 714 aa4.99□□□□□ -1.61
SHE10YGL228W NUP49Q02199 472 aa4.99□□□□□ -1.61
SHE10YGL228W OST6Q03723 332 aa4.99□□□□□ -1.61
SHE10YGL228W SEC13Q04491 297 aaKnown RBP4.99□□□□□ -1.61
SHE10YGL228W ARP10Q04549 284 aa4.99□□□□□ -1.61
SHE10YGL228W DFG5Q05031 458 aa4.99□□□□□ -1.61
SHE10YGL228W VID22Q05934 901 aa4.99□□□□□ -1.61
SHE10YGL228W FMP45Q07651 309 aa4.99□□□□□ -1.61
SHE10YGL228W YDL007C-AQ2V2Q0 85 aa4.99□□□□□ -1.61
SHE10YGL228W NAR1P23503 491 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W RPL5P26321 297 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W BAP2P38084 609 aa4.98□□□□□ -1.61
SHE10YGL228W RPS20P38701 121 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W ARN2P38724 620 aa4.98□□□□□ -1.61
SHE10YGL228W SKN7P38889 622 aa4.98□□□□□ -1.61
SHE10YGL228W TIF11P38912 153 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W AIM10P39965 576 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W SHR5P41912 237 aa4.98□□□□□ -1.61
SHE10YGL228W STB1P42845 420 aa4.98□□□□□ -1.61
SHE10YGL228W YGL235WP53071 178 aa4.98□□□□□ -1.61
SHE10YGL228W LSG1P53145 640 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W YNR062CP53748 327 aa4.98□□□□□ -1.61
SHE10YGL228W EKI1Q03764 534 aa4.98□□□□□ -1.61
SHE10YGL228W YMR087WQ04299 284 aa4.98□□□□□ -1.61
SHE10YGL228W PLM2Q04383 521 aa4.98□□□□□ -1.61
SHE10YGL228W ERB1Q04660 807 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W RNH1Q04740 348 aa4.98□□□□□ -1.61
SHE10YGL228W MCM21Q06675 368 aa4.98□□□□□ -1.61
SHE10YGL228W SYO1Q07395 620 aa4.98□□□□□ -1.61
SHE10YGL228W NOP12Q08208 459 aaKnown RBP4.98□□□□□ -1.61
SHE10YGL228W AKR2Q12013 749 aa4.98□□□□□ -1.61
SHE10YGL228W REX3Q12090 404 aa4.98□□□□□ -1.61
SHE10YGL228W TAD3Q9URQ3 322 aa4.98□□□□□ -1.61
SHE10YGL228W DPM1P14020 267 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W DPB2P24482 689 aaPredicted RBP4.97□□□□□ -1.61
SHE10YGL228W SBA1P28707 216 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W PRE2P30656 287 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W SEF1P34228 1148 aa4.97□□□□□ -1.61
SHE10YGL228W LST4P34239 828 aa4.97□□□□□ -1.61
SHE10YGL228W MTC4P38335 694 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W RPP1P38786 293 aa4.97□□□□□ -1.61
SHE10YGL228W CHL4P38907 458 aa4.97□□□□□ -1.61
SHE10YGL228W IRC7P43623 340 aa4.97□□□□□ -1.61
SHE10YGL228W SSY5P47002 699 aa4.97□□□□□ -1.61
SHE10YGL228W ATG21Q02887 496 aa4.97□□□□□ -1.61
SHE10YGL228W MAK3Q03503 176 aa4.97□□□□□ -1.61
SHE10YGL228W DML1Q03652 475 aa4.97□□□□□ -1.61
SHE10YGL228W MDM30Q05930 598 aa4.97□□□□□ -1.61
SHE10YGL228W AVO1Q08236 1176 aa4.97□□□□□ -1.61
SHE10YGL228W YOR376WQ08900 122 aa4.97□□□□□ -1.61
SHE10YGL228W RBD2Q12270 262 aa4.97□□□□□ -1.61
SHE10YGL228W HER1Q12276 1246 aa4.97□□□□□ -1.61
SHE10YGL228W IES3Q12345 250 aa4.97□□□□□ -1.61
SHE10YGL228W PNS1Q12412 539 aa4.97□□□□□ -1.61
SHE10YGL228W RAS1P01119 309 aa4.97□□□□□ -1.61
SHE10YGL228W YPT1P01123 206 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W PRP28P23394 588 aa4.97□□□□□ -1.61
SHE10YGL228W HSP30P25619 332 aa4.97□□□□□ -1.61
SHE10YGL228W SNC1P31109 117 aa4.97□□□□□ -1.61
SHE10YGL228W YEF1P32622 495 aa4.97□□□□□ -1.61
SHE10YGL228W JEN1P36035 616 aa4.97□□□□□ -1.61
SHE10YGL228W MDM31P38880 579 aa4.97□□□□□ -1.61
SHE10YGL228W NAB3P38996 802 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
SHE10YGL228W YIL166CP40445 542 aa4.97□□□□□ -1.61
SHE10YGL228W HXT9P40885 567 aa4.97□□□□□ -1.61
SHE10YGL228W OCA1P50946 238 aaPredicted RBP4.97□□□□□ -1.61
SHE10YGL228W NQM1P53228 333 aaPredicted RBP4.97□□□□□ -1.61
SHE10YGL228W BUD17P53727 317 aa4.97□□□□□ -1.61
SHE10YGL228W PGA1P53896 198 aa4.97□□□□□ -1.61
SHE10YGL228W HXT11P54862 567 aa4.97□□□□□ -1.61
SHE10YGL228W FIN1Q03898 291 aa4.97□□□□□ -1.61
SHE10YGL228W SNO4Q04902 237 aa4.97□□□□□ -1.61
SHE10YGL228W FMP42Q04991 504 aa4.97□□□□□ -1.61
SHE10YGL228W RSA3Q05942 220 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W SNT309Q06091 175 aaPredicted RBP4.97□□□□□ -1.61
SHE10YGL228W YPR127WQ06494 345 aa4.97□□□□□ -1.61
SHE10YGL228W YLR040CQ07988 224 aa4.97□□□□□ -1.61
SHE10YGL228W ENB1Q08299 606 aa4.97□□□□□ -1.61
SHE10YGL228W HSP33Q08914 237 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W YPL191CQ08930 360 aa4.97□□□□□ -1.61
SHE10YGL228W HSP32Q08992 237 aa4.97□□□□□ -1.61
SHE10YGL228W BTS1Q12051 335 aa4.97□□□□□ -1.61
SHE10YGL228W YDL177CQ12257 170 aa4.97□□□□□ -1.61
SHE10YGL228W PAR32Q12515 295 aaKnown RBP4.97□□□□□ -1.61
SHE10YGL228W TOR1P35169 2470 aa4.96□□□□□ -1.62
SHE10YGL228W MDH1P17505 334 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
SHE10YGL228W YCL002CP25565 263 aa4.96□□□□□ -1.62
SHE10YGL228W ARO7P32178 256 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms