RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID30	YGL227W	RTT103	Q05543	409 aa		4.61	□□□□□ -1.67
VID30	YGL227W	MMT2	Q08970	484 aa		4.61	□□□□□ -1.67
VID30	YGL227W	ARG4	P04076	463 aa	Predicted RBP	4.6	□□□□□ -1.67
VID30	YGL227W	GPH1	P06738	902 aa	Known RBP	4.6	□□□□□ -1.67
VID30	YGL227W	RPI1	P23250	407 aa	Known RBP	4.6	□□□□□ -1.67
VID30	YGL227W	CSM1	P25651	190 aa		4.6	□□□□□ -1.67
VID30	YGL227W	TRS65	P32893	560 aa		4.6	□□□□□ -1.67
VID30	YGL227W	ETR1	P38071	380 aa		4.6	□□□□□ -1.67
VID30	YGL227W	ATG14	P38270	344 aa		4.6	□□□□□ -1.67
VID30	YGL227W	RTT107	P38850	1070 aa		4.6	□□□□□ -1.67
VID30	YGL227W	PRM2	P40534	656 aa		4.6	□□□□□ -1.67
VID30	YGL227W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
VID30	YGL227W	LIA1	P47120	325 aa	Known RBP	4.6	□□□□□ -1.67
VID30	YGL227W	ECM27	P47144	725 aa		4.6	□□□□□ -1.67
VID30	YGL227W	TOM22	P49334	152 aa		4.6	□□□□□ -1.67
VID30	YGL227W	MIG2	P53035	382 aa		4.6	□□□□□ -1.67
VID30	YGL227W	NMA111	P53920	997 aa		4.6	□□□□□ -1.67
VID30	YGL227W	TVP15	Q03860	143 aa		4.6	□□□□□ -1.67
VID30	YGL227W	YMR114C	Q04471	368 aa	Known RBP	4.6	□□□□□ -1.67
VID30	YGL227W	APC4	Q04601	652 aa		4.6	□□□□□ -1.67
VID30	YGL227W	YDL177C	Q12257	170 aa		4.6	□□□□□ -1.67
VID30	YGL227W	Q0144	Q9ZZW2	109 aa		4.6	□□□□□ -1.67
VID30	YGL227W	VPS33	P20795	691 aa		4.6	□□□□□ -1.67
VID30	YGL227W	RIO2	P40160	425 aa	Known RBP	4.6	□□□□□ -1.67
VID30	YGL227W	YGL185C	P53100	379 aa		4.6	□□□□□ -1.67
VID30	YGL227W	ARI1	P53111	347 aa	Known RBP	4.6	□□□□□ -1.67
VID30	YGL227W	YNL140C	P53910	189 aa		4.6	□□□□□ -1.67
VID30	YGL227W	RHO4	Q00246	291 aa		4.6	□□□□□ -1.67
VID30	YGL227W	GSH2	Q08220	491 aa		4.6	□□□□□ -1.67
VID30	YGL227W	ENV7	Q12003	364 aa		4.6	□□□□□ -1.67
VID30	YGL227W	SWT1	Q12104	458 aa		4.6	□□□□□ -1.67
VID30	YGL227W	SEC53	P07283	254 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-DR6	P0CX70	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-ER1	P0CX71	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-LR2	P0CX72	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-PL	P0CX73	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-JR1	P0CX74	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-LR3	P0CX75	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-ML2	P0CX76	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	NFS1	P25374	497 aa		4.59	□□□□□ -1.67
VID30	YGL227W	MRP20	P32387	263 aa		4.59	□□□□□ -1.67
VID30	YGL227W	RCY1	P39531	840 aa		4.59	□□□□□ -1.67
VID30	YGL227W	MIC19	P43594	170 aa		4.59	□□□□□ -1.67
VID30	YGL227W	RBS1	Q05672	457 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	MFG1	Q07684	458 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-GR1	Q12085	440 aa		4.59	□□□□□ -1.67
VID30	YGL227W	MDM32	Q12171	622 aa		4.59	□□□□□ -1.67
VID30	YGL227W	ISA2	Q12425	185 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	TY1A-OL	Q92392	440 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	MOD5	P07884	428 aa		4.59	□□□□□ -1.67
VID30	YGL227W	MSS116	P15424	664 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	CAT2	P32796	670 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	MTR2	P34232	184 aa	Known RBP	4.59	□□□□□ -1.67
VID30	YGL227W	YKR015C	P36111	568 aa		4.59	□□□□□ -1.67
VID30	YGL227W	VRG4	P40107	337 aa		4.59	□□□□□ -1.67
VID30	YGL227W	TIM13	P53299	105 aa		4.59	□□□□□ -1.67
VID30	YGL227W	ATG21	Q02887	496 aa		4.59	□□□□□ -1.67
VID30	YGL227W	ARP10	Q04549	284 aa		4.59	□□□□□ -1.67
VID30	YGL227W	YLL007C	Q07799	665 aa		4.59	□□□□□ -1.67
VID30	YGL227W	CYR1	P08678	2026 aa	Known RBP	4.59	□□□□□ -1.68
VID30	YGL227W	YSF3	P0C074	85 aa	Predicted RBP	4.59	□□□□□ -1.68
VID30	YGL227W	AFG1	P32317	509 aa		4.59	□□□□□ -1.68
VID30	YGL227W	ARO4	P32449	370 aa	Known RBP	4.59	□□□□□ -1.68
VID30	YGL227W	ECM15	P35195	104 aa		4.59	□□□□□ -1.68
VID30	YGL227W	BZZ1	P38822	633 aa		4.59	□□□□□ -1.68
VID30	YGL227W	GAB1	P41733	394 aa		4.59	□□□□□ -1.68
VID30	YGL227W	AAD14	P42884	376 aa		4.59	□□□□□ -1.68
VID30	YGL227W	RMR1	P53060	241 aa		4.59	□□□□□ -1.68
VID30	YGL227W	SWP1	Q02795	286 aa		4.59	□□□□□ -1.68
VID30	YGL227W	RAD34	Q06665	692 aa		4.59	□□□□□ -1.68
VID30	YGL227W	YPR011C	Q12251	326 aa		4.59	□□□□□ -1.68
VID30	YGL227W	HER1	Q12276	1246 aa		4.59	□□□□□ -1.68
VID30	YGL227W	SAS5	Q99314	248 aa		4.59	□□□□□ -1.68
VID30	YGL227W	NUM1	Q00402	2748 aa		4.58	□□□□□ -1.68
VID30	YGL227W	RHO2	P06781	192 aa		4.58	□□□□□ -1.68
VID30	YGL227W	RPL35A	P0CX84	120 aa	Known RBP	4.58	□□□□□ -1.68
VID30	YGL227W	RPL35B	P0CX85	120 aa	Known RBP	4.58	□□□□□ -1.68
VID30	YGL227W	RPO26	P20435	155 aa		4.58	□□□□□ -1.68
VID30	YGL227W	DAD2	P36162	133 aa		4.58	□□□□□ -1.68
VID30	YGL227W	MSS4	P38994	779 aa		4.58	□□□□□ -1.68
VID30	YGL227W	ALG5	P40350	334 aa		4.58	□□□□□ -1.68
VID30	YGL227W	RPE1	P46969	238 aa		4.58	□□□□□ -1.68
VID30	YGL227W	GTO1	P48239	356 aa		4.58	□□□□□ -1.68
VID30	YGL227W	YNR040W	P53736	256 aa		4.58	□□□□□ -1.68
VID30	YGL227W	CUZ1	P53899	274 aa		4.58	□□□□□ -1.68
VID30	YGL227W	NNT1	Q05874	261 aa		4.58	□□□□□ -1.68
VID30	YGL227W	CDC21	P06785	304 aa		4.58	□□□□□ -1.68
VID30	YGL227W	BAR1	P12630	587 aa		4.58	□□□□□ -1.68
VID30	YGL227W	CPR2	P23285	205 aa		4.58	□□□□□ -1.68
VID30	YGL227W	BCK2	P33306	851 aa		4.58	□□□□□ -1.68
VID30	YGL227W	TDP1	P38319	544 aa		4.58	□□□□□ -1.68
VID30	YGL227W	YJL043W	P47053	257 aa		4.58	□□□□□ -1.68
VID30	YGL227W	YNR071C	P53757	342 aa		4.58	□□□□□ -1.68
VID30	YGL227W	SDO1	Q07953	250 aa	Known RBP	4.58	□□□□□ -1.68
VID30	YGL227W	COQ10	Q08058	207 aa		4.58	□□□□□ -1.68
VID30	YGL227W	NTO1	Q12311	748 aa		4.58	□□□□□ -1.68
VID30	YGL227W	HEM4	P06174	275 aa		4.57	□□□□□ -1.68
VID30	YGL227W	NSP1	P14907	823 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms