RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C YPL068CQ02749 293 aa3.46□□□□□ -1.86
OTU1YFL044C SKI8Q02793 397 aaPredicted RBP3.46□□□□□ -1.86
OTU1YFL044C YDR239CQ03780 787 aa3.46□□□□□ -1.86
OTU1YFL044C GIS1Q03833 894 aa3.46□□□□□ -1.86
OTU1YFL044C CSN9Q03981 162 aa3.46□□□□□ -1.86
OTU1YFL044C BUD22Q04347 519 aaKnown RBP3.46□□□□□ -1.86
OTU1YFL044C RIF2Q06208 395 aa3.46□□□□□ -1.86
OTU1YFL044C ULA1Q12059 462 aa3.46□□□□□ -1.86
OTU1YFL044C BAG7Q12128 409 aa3.46□□□□□ -1.86
OTU1YFL044C YOS9Q99220 542 aa3.46□□□□□ -1.86
OTU1YFL044C ARG4P04076 463 aaPredicted RBP3.45□□□□□ -1.86
OTU1YFL044C ADE5,7P07244 802 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C DFR1P07807 211 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
OTU1YFL044C SGV1P23293 657 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C PDB1P32473 366 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C PPZ2P33329 710 aa3.45□□□□□ -1.86
OTU1YFL044C ASK1P35734 292 aa3.45□□□□□ -1.86
OTU1YFL044C LHS1P36016 881 aa3.45□□□□□ -1.86
OTU1YFL044C SNU114P36048 1008 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C SPC97P38863 823 aa3.45□□□□□ -1.86
OTU1YFL044C YDR089WP38966 869 aa3.45□□□□□ -1.86
OTU1YFL044C LSM4P40070 187 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C PEP8P40335 379 aa3.45□□□□□ -1.86
OTU1YFL044C COA1P40452 197 aa3.45□□□□□ -1.86
OTU1YFL044C SNO3P43544 222 aa3.45□□□□□ -1.86
OTU1YFL044C YFL015CP43578 164 aa3.45□□□□□ -1.86
OTU1YFL044C ECO1P43605 281 aa3.45□□□□□ -1.86
OTU1YFL044C STE24P47154 453 aa3.45□□□□□ -1.86
OTU1YFL044C YGR066CP53242 292 aa3.45□□□□□ -1.86
OTU1YFL044C YGR067CP53243 804 aa3.45□□□□□ -1.86
OTU1YFL044C IST1P53843 298 aaPredicted RBP3.45□□□□□ -1.86
OTU1YFL044C PDR16P53860 351 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C YMR209CQ03648 457 aa3.45□□□□□ -1.86
OTU1YFL044C CGI121Q03705 181 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C ERB1Q04660 807 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C RQC1Q05468 723 aaKnown RBP3.45□□□□□ -1.86
OTU1YFL044C YPR172WQ06608 200 aa3.45□□□□□ -1.86
OTU1YFL044C ESA1Q08649 445 aa3.45□□□□□ -1.86
OTU1YFL044C GET4Q12125 312 aa3.45□□□□□ -1.86
OTU1YFL044C RRP36Q12481 300 aaPredicted RBP3.45□□□□□ -1.86
OTU1YFL044C CDC8P00572 216 aa3.44□□□□□ -1.86
OTU1YFL044C CDC36P06100 191 aaPredicted RBP3.44□□□□□ -1.86
OTU1YFL044C CBS2P14905 389 aa3.44□□□□□ -1.86
OTU1YFL044C SRV2P17555 526 aaKnown RBP3.44□□□□□ -1.86
OTU1YFL044C VMA16P23968 213 aa3.44□□□□□ -1.86
OTU1YFL044C CLB3P24870 427 aa3.44□□□□□ -1.86
OTU1YFL044C STE50P25344 346 aa3.44□□□□□ -1.86
OTU1YFL044C ILV6P25605 309 aaKnown RBP3.44□□□□□ -1.86
OTU1YFL044C LAC1P28496 418 aa3.44□□□□□ -1.86
OTU1YFL044C VPS21P36017 210 aaKnown RBP3.44□□□□□ -1.86
OTU1YFL044C LAS1P36146 502 aaPredicted RBP3.44□□□□□ -1.86
OTU1YFL044C YCR087C-AP37263 153 aa3.44□□□□□ -1.86
OTU1YFL044C TRR2P38816 342 aa3.44□□□□□ -1.86
OTU1YFL044C TDA11P38854 504 aa3.44□□□□□ -1.86
OTU1YFL044C FAD1P38913 306 aa3.44□□□□□ -1.86
OTU1YFL044C PAC2P39937 518 aa3.44□□□□□ -1.86
OTU1YFL044C ALB1P47019 175 aaPredicted RBP3.44□□□□□ -1.86
OTU1YFL044C YJL043WP47053 257 aa3.44□□□□□ -1.86
OTU1YFL044C APS3P47064 194 aa3.44□□□□□ -1.86
OTU1YFL044C EMC2P47133 292 aaKnown RBP3.44□□□□□ -1.86
OTU1YFL044C YNL140CP53910 189 aa3.44□□□□□ -1.86
OTU1YFL044C RSM28Q03430 361 aa3.44□□□□□ -1.86
OTU1YFL044C PLM2Q04383 521 aa3.44□□□□□ -1.86
OTU1YFL044C SWF1Q04629 336 aa3.44□□□□□ -1.86
OTU1YFL044C YDR286CQ05530 114 aa3.44□□□□□ -1.86
OTU1YFL044C SEC10Q06245 871 aa3.44□□□□□ -1.86
OTU1YFL044C LUC7Q07508 261 aaPredicted RBP3.44□□□□□ -1.86
OTU1YFL044C YOR365CQ08844 703 aa3.44□□□□□ -1.86
OTU1YFL044C HER1Q12276 1246 aa3.44□□□□□ -1.86
OTU1YFL044C HXK2P04807 486 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C ILV2P07342 687 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C YSF3P0C074 85 aaPredicted RBP3.43□□□□□ -1.86
OTU1YFL044C MRP13P12686 339 aa3.43□□□□□ -1.86
OTU1YFL044C NMT1P14743 455 aa3.43□□□□□ -1.86
OTU1YFL044C KGD1P20967 1014 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C YCR051WP25631 222 aa3.43□□□□□ -1.86
OTU1YFL044C ERV1P27882 189 aa3.43□□□□□ -1.86
OTU1YFL044C ZIP1P31111 875 aa3.43□□□□□ -1.86
OTU1YFL044C PTR2P32901 601 aa3.43□□□□□ -1.86
OTU1YFL044C MSN2P33748 704 aa3.43□□□□□ -1.86
OTU1YFL044C SPO23P33757 523 aa3.43□□□□□ -1.86
OTU1YFL044C TIF3P34167 436 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C VBA2P38358 474 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C SEC31P38968 1273 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C XBP1P40489 647 aa3.43□□□□□ -1.86
OTU1YFL044C MNN5P46982 586 aa3.43□□□□□ -1.86
OTU1YFL044C AIM22P47051 409 aa3.43□□□□□ -1.86
OTU1YFL044C YJR141WP47172 347 aaPredicted RBP3.43□□□□□ -1.86
OTU1YFL044C ATP22P50273 684 aaPredicted RBP3.43□□□□□ -1.86
OTU1YFL044C YPT32P51996 222 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C AIF1P52923 378 aa3.43□□□□□ -1.86
OTU1YFL044C GTR2P53290 341 aa3.43□□□□□ -1.86
OTU1YFL044C DCP2P53550 970 aaKnown RBP3.43□□□□□ -1.86
OTU1YFL044C SLM2P53955 656 aa3.43□□□□□ -1.86
OTU1YFL044C YLR460CP54007 376 aa3.43□□□□□ -1.86
OTU1YFL044C IRC15Q02733 499 aa3.43□□□□□ -1.86
OTU1YFL044C PFA5Q03289 374 aa3.43□□□□□ -1.86
OTU1YFL044C RAD33Q04231 177 aa3.43□□□□□ -1.86
OTU1YFL044C YMR111CQ04461 462 aaPredicted RBP3.43□□□□□ -1.86
OTU1YFL044C SMA2Q04658 369 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms