RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	UIP4	Q08926	304 aa		5.62	□□□□□ -1.51
RPT3	YDR394W	RKM1	Q08961	583 aa	Predicted RBP	5.62	□□□□□ -1.51
RPT3	YDR394W	SOD2	P00447	233 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	CAR2	P07991	424 aa	Known RBP	5.61	□□□□□ -1.51
RPT3	YDR394W	GAL7	P08431	366 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	CBS1	P14066	229 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	VPS33	P20795	691 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	APN1	P22936	367 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	SUI1	P32911	108 aa	Known RBP	5.61	□□□□□ -1.51
RPT3	YDR394W	YPT7	P32939	208 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	PIM1	P36775	1133 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	YHK8	P38776	514 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	GDI1	P39958	451 aa	Known RBP	5.61	□□□□□ -1.51
RPT3	YDR394W	GDS1	P41913	522 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	ZIM17	P42844	174 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	SER2	P42941	309 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	BAT2	P47176	376 aa	Known RBP	5.61	□□□□□ -1.51
RPT3	YDR394W	AAD10	P47182	288 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	MSE1	P48525	536 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	HNT2	P49775	206 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	HOS2	P53096	452 aa	Predicted RBP	5.61	□□□□□ -1.51
RPT3	YDR394W	MEP3	P53390	489 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	COS1	P53822	381 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	MTQ1	P53944	314 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	FIN1	Q03898	291 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	ELP6	Q04868	273 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	RQC1	Q05468	723 aa	Known RBP	5.61	□□□□□ -1.51
RPT3	YDR394W	VID22	Q05934	901 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	YLR125W	Q12138	136 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	YOL107W	Q12239	342 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	TPO4	Q12256	659 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	APC2	Q12440	853 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	SKS1	Q12505	502 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	LAG2	Q92325	660 aa		5.61	□□□□□ -1.51
RPT3	YDR394W	RPS13	P05756	151 aa	Known RBP	5.6	□□□□□ -1.51
RPT3	YDR394W	DPM1	P14020	267 aa	Known RBP	5.6	□□□□□ -1.51
RPT3	YDR394W	SNF6	P18888	332 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	MGR1	P25573	417 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	SRB5	P32585	307 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	PET112	P33893	541 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	ZRT3	P34240	503 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	RSM22	P36056	628 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	YBR063C	P38083	404 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	MCM7	P38132	845 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	SRO77	P38163	1010 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	YHR097C	P38809	366 aa	Known RBP	5.6	□□□□□ -1.51
RPT3	YDR394W	ALP1	P38971	573 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	MBP1	P39678	833 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	AIM10	P39965	576 aa	Known RBP	5.6	□□□□□ -1.51
RPT3	YDR394W	YEL068C	P39977	110 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	IDS2	P46958	469 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	COS10	P52924	374 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	MAL11	P53048	616 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	ORM1	P53224	222 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	PFA5	Q03289	374 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	RGC1	Q06108	1083 aa	Known RBP	5.6	□□□□□ -1.51
RPT3	YDR394W	YLR173W	Q06247	608 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	MLC2	Q06580	163 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	LEU9	Q12166	604 aa	Known RBP	5.6	□□□□□ -1.51
RPT3	YDR394W	YOR214C	Q12282	236 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	RTN2	Q12443	393 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	PCL9	Q12477	304 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	SFG1	Q12507	346 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	SUS1	Q6WNK7	96 aa		5.6	□□□□□ -1.51
RPT3	YDR394W	MET2	P08465	486 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	SEC12	P11655	471 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	CDC34	P14682	295 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	MCK1	P21965	375 aa	Known RBP	5.59	□□□□□ -1.51
RPT3	YDR394W	DBF2	P22204	572 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	PPH21	P23594	369 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	AGP1	P25376	633 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	HSP30	P25619	332 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	LYP1	P32487	611 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	RML2	P32611	393 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	MSN2	P33748	704 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	MTC2	P34246	357 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	YOR062C	P36025	268 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	PRP39	P39682	629 aa	Known RBP	5.59	□□□□□ -1.51
RPT3	YDR394W	LRO1	P40345	661 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	PFS2	P42841	465 aa	Known RBP	5.59	□□□□□ -1.51
RPT3	YDR394W	IRC6	P43615	237 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	MDV1	P47025	714 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	YGL101W	P53144	215 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	CDH1	P53197	566 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	SYF2	P53277	215 aa	Predicted RBP	5.59	□□□□□ -1.51
RPT3	YDR394W	RNH70	P53331	553 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	DBP6	P53734	629 aa	Known RBP	5.59	□□□□□ -1.51
RPT3	YDR394W	FDC1	Q03034	503 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	TDA1	Q03533	586 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	OST6	Q03723	332 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	SPC19	Q03954	165 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	YML096W	Q04489	525 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	NAT4	Q04751	285 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	YPR196W	Q06595	470 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	IRC13	Q08630	104 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	HSP42	Q12329	375 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	SCM3	Q12334	223 aa		5.59	□□□□□ -1.51
RPT3	YDR394W	RRP12	Q12754	1228 aa	Known RBP	5.59	□□□□□ -1.51
RPT3	YDR394W	CYC1	P00044	109 aa	Predicted RBP	5.58	□□□□□ -1.52
RPT3	YDR394W	RPL6B	P05739	176 aa	Known RBP	5.58	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms