RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	YHR035W	P38769	630 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	PRM9	P39551	298 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	ACA1	P39970	489 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	PIG2	P40187	538 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	SWM2	P40342	146 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	PKP1	P40530	394 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	SSU1	P41930	458 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	PSA1	P41940	361 aa	Known RBP	4.7	□□□□□ -1.66
PAL1	YDR348C	TAD2	P47058	250 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	TIS11	P47977	285 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	PRP24	P49960	444 aa	Known RBP	4.7	□□□□□ -1.66
PAL1	YDR348C	MNT2	P53059	558 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	SHY1	P53266	389 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	MRPL22	P53881	309 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	VBA1	Q04301	562 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	MDM30	Q05930	598 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	YLR225C	Q05948	407 aa	Known RBP	4.7	□□□□□ -1.66
PAL1	YDR348C	YLR173W	Q06247	608 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	YTM1	Q12024	460 aa	Predicted RBP	4.7	□□□□□ -1.66
PAL1	YDR348C	EAF3	Q12432	401 aa		4.7	□□□□□ -1.66
PAL1	YDR348C	SLH1	P53327	1967 aa	Known RBP	4.7	□□□□□ -1.66
PAL1	YDR348C	ATP4	P05626	244 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	ARG80	P07249	177 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	DAL81	P21657	970 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	APN1	P22936	367 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	BUD5	P25300	642 aa	Predicted RBP	4.69	□□□□□ -1.66
PAL1	YDR348C	RSC6	P25632	483 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	YIH1	P25637	258 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	SCM4	P32564	187 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	SPT10	P35208	640 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	TMA19	P35691	167 aa	Known RBP	4.69	□□□□□ -1.66
PAL1	YDR348C	RPF2	P36160	344 aa	Known RBP	4.69	□□□□□ -1.66
PAL1	YDR348C	REG2	P38232	338 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	ERV15	P38312	142 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	YHR122W	P38829	231 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	PZF1	P39933	429 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	ELO3	P40319	345 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	RFC4	P40339	323 aa	Known RBP	4.69	□□□□□ -1.66
PAL1	YDR348C	PGD1	P40356	397 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	PAN6	P40459	309 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	FMC1	P40491	155 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	PAM16	P42949	149 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	RPE1	P46969	238 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	MRX5	P47007	382 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	DOC1	P53068	250 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	OCA2	P53949	197 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	NUP100	Q02629	959 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	CWC21	Q03375	135 aa	Known RBP	4.69	□□□□□ -1.66
PAL1	YDR348C	RRP40	Q08285	240 aa	Known RBP	4.69	□□□□□ -1.66
PAL1	YDR348C	YOL114C	Q12322	202 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	PSF1	Q12488	208 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	Q0142	Q9ZZW4	58 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	Q0010	Q9ZZX9	128 aa		4.69	□□□□□ -1.66
PAL1	YDR348C	HIS5	P07172	385 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	GCD1	P09032	578 aa	Predicted RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	HOM2	P13663	365 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	CDC23	P16522	626 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	APA1	P16550	321 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	ERD2	P18414	219 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	STE50	P25344	346 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	MGR1	P25573	417 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	YUR1	P26725	428 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
PAL1	YDR348C	CYS3	P31373	394 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	CDC12	P32468	407 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	YPT7	P32939	208 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	YKL162C	P36052	402 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	HTD2	P38790	280 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	SLM1	P40485	686 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	UTP25	P40498	721 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	NNF1	P47149	201 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	RAD17	P48581	401 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	MNN10	P50108	393 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	COS10	P52924	374 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	MTL1	P53214	551 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	VOA1	P53262	265 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	BUD17	P53727	317 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	CDC14	Q00684	551 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	AAT1	Q01802	451 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	EGD1	Q02642	157 aa	Known RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	IRC15	Q02733	499 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	PEX25	Q02969	394 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	MET31	Q03081	177 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	SNO1	Q03144	224 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	YDR387C	Q04162	555 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	LUC7	Q07508	261 aa	Predicted RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	CYK3	Q07533	885 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	RCL1	Q08096	367 aa	Predicted RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	ATG41	Q12048	136 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	TIR4	Q12218	487 aa	Predicted RBP	4.68	□□□□□ -1.66
PAL1	YDR348C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
PAL1	YDR348C	RDI1	Q12434	202 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	CTF3	Q12748	733 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	AFI1	Q99222	893 aa		4.68	□□□□□ -1.66
PAL1	YDR348C	ERD1	P16151	362 aa		4.67	□□□□□ -1.66
PAL1	YDR348C	GLK1	P17709	500 aa	Known RBP	4.67	□□□□□ -1.66
PAL1	YDR348C	RRP7	P25368	297 aa	Predicted RBP	4.67	□□□□□ -1.66
PAL1	YDR348C	YCL002C	P25565	263 aa		4.67	□□□□□ -1.66
PAL1	YDR348C	PRE4	P30657	266 aa		4.67	□□□□□ -1.66
PAL1	YDR348C	YPT52	P36018	234 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms