RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	SOK2	P53438	785 aa	Predicted RBP	5.73	□□□□□ -1.49
CDC1	YDR182W	IGO1	P53897	168 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	YPL039W	Q03080	316 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	TY1A-DR2	Q03964	440 aa	Known RBP	5.73	□□□□□ -1.49
CDC1	YDR182W	MUM3	Q08750	479 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	MCP1	Q12106	302 aa		5.73	□□□□□ -1.49
CDC1	YDR182W	MET2	P08465	486 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	GAL3	P13045	520 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	SCO1	P23833	295 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	SAC1	P32368	623 aa	Known RBP	5.72	□□□□□ -1.49
CDC1	YDR182W	TSL1	P38427	1098 aa	Known RBP	5.72	□□□□□ -1.49
CDC1	YDR182W	MRX1	P40050	688 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	NTA1	P40354	457 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	IAH1	P41734	238 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	YGR201C	P42936	225 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	YFL051C	P43552	160 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	YNL033W	P53964	284 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	YNL019C	P53975	284 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	ATG38	Q05789	226 aa	Known RBP	5.72	□□□□□ -1.49
CDC1	YDR182W	COQ11	Q05892	277 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	AVO1	Q08236	1176 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	BTS1	Q12051	335 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	YDL109C	Q12103	647 aa		5.72	□□□□□ -1.49
CDC1	YDR182W	YOR097C	Q12274	175 aa	Predicted RBP	5.72	□□□□□ -1.49
CDC1	YDR182W	CDC36	P06100	191 aa	Predicted RBP	5.71	□□□□□ -1.49
CDC1	YDR182W	TFS1	P14306	219 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	UGA1	P17649	471 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	UTR1	P21373	530 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	PEX6	P33760	1030 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	COS9	P36034	407 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	ARN2	P38724	620 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	YHR097C	P38809	366 aa	Known RBP	5.71	□□□□□ -1.49
CDC1	YDR182W	GAT2	P40209	560 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	RFC4	P40339	323 aa	Known RBP	5.71	□□□□□ -1.49
CDC1	YDR182W	HXT9	P40885	567 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	YGR126W	P53274	230 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	HXT11	P54862	567 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	TPS1	Q00764	495 aa	Known RBP	5.71	□□□□□ -1.49
CDC1	YDR182W	GGA1	Q06336	557 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	RAF1	Q06891	181 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	HNT3	Q08702	217 aa		5.71	□□□□□ -1.49
CDC1	YDR182W	YAL064W-B	O13512	126 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	PDA1	P16387	420 aa	Known RBP	5.71	□□□□□ -1.5
CDC1	YDR182W	GSH1	P32477	678 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	MDL1	P33310	695 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	GDH2	P33327	1092 aa	Known RBP	5.71	□□□□□ -1.5
CDC1	YDR182W	MRP8	P35719	219 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	RRP4	P38792	359 aa	Known RBP	5.71	□□□□□ -1.5
CDC1	YDR182W	YHR218W	P38899	603 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	GPP1	P41277	250 aa	Known RBP	5.71	□□□□□ -1.5
CDC1	YDR182W	ADO1	P47143	340 aa	Known RBP	5.71	□□□□□ -1.5
CDC1	YDR182W	TOM22	P49334	152 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	API2	Q04413	109 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	ARO10	Q06408	635 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	VPS36	Q06696	566 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	RSA1	Q08932	381 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	YDL199C	Q12407	687 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	DFG16	Q99234	619 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	YOL087C	Q99247	1116 aa		5.71	□□□□□ -1.5
CDC1	YDR182W	TIM9	O74700	87 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	SUI3	P09064	285 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	RER1	P25560	188 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	HSP30	P25619	332 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	PEX3	P28795	441 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	ATP7	P30902	174 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	RPN2	P32565	945 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	CYS4	P32582	507 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	MRPL39	P36533	70 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	AIM46	P38885	310 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	YMR144W	P40214	342 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	YIL165C	P40446	119 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	SNM1	P40993	198 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	NUP57	P48837	541 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	SNF12	P53628	566 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	TIM10	P87108	93 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	MRP51	Q02950	344 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	EMG1	Q06287	252 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	MRL1	Q06815	381 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	ASA1	Q06822	443 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	NOP12	Q08208	459 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	RRT8	Q08219	342 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	THP1	Q08231	455 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	YDL180W	Q12301	547 aa		5.7	□□□□□ -1.5
CDC1	YDR182W	WTM1	Q12363	437 aa	Known RBP	5.7	□□□□□ -1.5
CDC1	YDR182W	RAD7	P06779	565 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	HIR2	P32480	875 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	SSE1	P32589	693 aa	Known RBP	5.69	□□□□□ -1.5
CDC1	YDR182W	SWH1	P35845	1188 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	MAL32	P38158	584 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	YHL037C	P38733	133 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	MPM1	P40364	252 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	RLP7	P40693	322 aa	Known RBP	5.69	□□□□□ -1.5
CDC1	YDR182W	IDP2	P41939	412 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	MPC1	P53157	130 aa	Known RBP	5.69	□□□□□ -1.5
CDC1	YDR182W	GPI1	P53306	609 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	MEP3	P53390	489 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	NAN1	Q02931	896 aa	Known RBP	5.69	□□□□□ -1.5
CDC1	YDR182W	KAP120	Q02932	1032 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	ATG26	Q06321	1198 aa		5.69	□□□□□ -1.5
CDC1	YDR182W	GPI11	Q06636	219 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms