RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W YMR030W-AQ3E760 96 aa0.97□□□□□ -2.25
SCC2YDR180W AI5_BETAQ9ZZX0 354 aa0.97□□□□□ -2.25
SCC2YDR180W YLR358CO13565 187 aa0.97□□□□□ -2.25
SCC2YDR180W RPL9AP05738 191 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W ADE5,7P07244 802 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W CUP2P15315 225 aa0.97□□□□□ -2.25
SCC2YDR180W FUS3P16892 353 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W APN1P22936 367 aa0.97□□□□□ -2.25
SCC2YDR180W PPH21P23594 369 aa0.97□□□□□ -2.25
SCC2YDR180W SEC1P30619 724 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W SMY1P32364 656 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W SSO1P32867 290 aa0.97□□□□□ -2.25
SCC2YDR180W SRB2P34162 210 aa0.97□□□□□ -2.25
SCC2YDR180W SPT10P35208 640 aa0.97□□□□□ -2.25
SCC2YDR180W OAR1P35731 278 aa0.97□□□□□ -2.25
SCC2YDR180W SNU114P36048 1008 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W NAT2P37293 288 aa0.97□□□□□ -2.25
SCC2YDR180W YBP1P38315 674 aa0.97□□□□□ -2.25
SCC2YDR180W TRM5P38793 499 aa0.97□□□□□ -2.25
SCC2YDR180W ARO9P38840 513 aaPredicted RBP0.97□□□□□ -2.25
SCC2YDR180W EGD2P38879 174 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W AIM18P38884 321 aa0.97□□□□□ -2.25
SCC2YDR180W PCL7P40186 285 aa0.97□□□□□ -2.25
SCC2YDR180W ATM1P40416 690 aa0.97□□□□□ -2.25
SCC2YDR180W YIL054WP40524 105 aa0.97□□□□□ -2.25
SCC2YDR180W IDP2P41939 412 aa0.97□□□□□ -2.25
SCC2YDR180W GAT1P43574 510 aa0.97□□□□□ -2.25
SCC2YDR180W TOS3P43637 560 aa0.97□□□□□ -2.25
SCC2YDR180W RPL9BP51401 191 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W MNP1P53163 194 aaPredicted RBP0.97□□□□□ -2.25
SCC2YDR180W YNL144CP53907 740 aa0.97□□□□□ -2.25
SCC2YDR180W SLG1P54867 378 aa0.97□□□□□ -2.25
SCC2YDR180W URC2Q04411 772 aa0.97□□□□□ -2.25
SCC2YDR180W YMR253CQ04835 414 aa0.97□□□□□ -2.25
SCC2YDR180W GFD1Q04839 188 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W HRD3Q05787 833 aa0.97□□□□□ -2.25
SCC2YDR180W ATG38Q05789 226 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W ATG17Q06410 417 aa0.97□□□□□ -2.25
SCC2YDR180W AIM6Q07716 390 aa0.97□□□□□ -2.25
SCC2YDR180W ATX2Q12067 313 aa0.97□□□□□ -2.25
SCC2YDR180W RRD2Q12461 358 aa0.97□□□□□ -2.25
SCC2YDR180W VMA9Q3E7B6 73 aa0.97□□□□□ -2.25
SCC2YDR180W CBP6P07253 162 aaPredicted RBP0.97□□□□□ -2.25
SCC2YDR180W DDI2P0CH63 225 aa0.97□□□□□ -2.25
SCC2YDR180W DDI3P0CH64 225 aa0.97□□□□□ -2.25
SCC2YDR180W PRP2P20095 876 aaPredicted RBP0.97□□□□□ -2.25
SCC2YDR180W POF1P25576 258 aa0.97□□□□□ -2.25
SCC2YDR180W SPB1P25582 841 aaPredicted RBP0.97□□□□□ -2.25
SCC2YDR180W COQ3P27680 312 aa0.97□□□□□ -2.25
SCC2YDR180W PMI40P29952 429 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W CAT2P32796 670 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W DOA1P36037 715 aa0.97□□□□□ -2.25
SCC2YDR180W SDH4P37298 181 aa0.97□□□□□ -2.25
SCC2YDR180W YBR259WP38338 688 aa0.97□□□□□ -2.25
SCC2YDR180W SMF2P38778 549 aa0.97□□□□□ -2.25
SCC2YDR180W SEN34P39707 275 aa0.97□□□□□ -2.25
SCC2YDR180W RTT105P40063 208 aa0.97□□□□□ -2.25
SCC2YDR180W LSB3P43603 459 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W ARC1P46672 376 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W MNN5P46982 586 aa0.97□□□□□ -2.25
SCC2YDR180W BIO3P50277 480 aa0.97□□□□□ -2.25
SCC2YDR180W YGL117WP53133 265 aa0.97□□□□□ -2.25
SCC2YDR180W SNO1Q03144 224 aa0.97□□□□□ -2.25
SCC2YDR180W YAP6Q03935 383 aa0.97□□□□□ -2.25
SCC2YDR180W TRM12Q04235 462 aa0.97□□□□□ -2.25
SCC2YDR180W MRN1Q08925 612 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
SCC2YDR180W YPL191CQ08930 360 aa0.97□□□□□ -2.25
SCC2YDR180W RPN5Q12250 445 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W YLR118CQ12354 227 aa0.97□□□□□ -2.25
SCC2YDR180W YDL199CQ12407 687 aa0.97□□□□□ -2.25
SCC2YDR180W RRP36Q12481 300 aaPredicted RBP0.97□□□□□ -2.25
SCC2YDR180W RRP12Q12754 1228 aaKnown RBP0.97□□□□□ -2.25
SCC2YDR180W YLR462WO13556 202 aa0.96□□□□□ -2.26
SCC2YDR180W YBR085C-AO43137 85 aa0.96□□□□□ -2.26
SCC2YDR180W MES1P00958 751 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W ADH3P07246 375 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W RPS18AP0CX55 146 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W RPS18BP0CX56 146 aaPredicted RBP0.96□□□□□ -2.26
SCC2YDR180W MDH1P17505 334 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
SCC2YDR180W HPR1P17629 752 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W SGV1P23293 657 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W GRR1P24814 1151 aa0.96□□□□□ -2.26
SCC2YDR180W LOT5P34234 306 aa0.96□□□□□ -2.26
SCC2YDR180W YKL102CP34249 101 aa0.96□□□□□ -2.26
SCC2YDR180W POL12P38121 705 aaPredicted RBP0.96□□□□□ -2.26
SCC2YDR180W RFS1P38234 210 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W YHL049CP38722 271 aa0.96□□□□□ -2.26
SCC2YDR180W FAD1P38913 306 aa0.96□□□□□ -2.26
SCC2YDR180W YEL075CP39972 122 aa0.96□□□□□ -2.26
SCC2YDR180W YER189WP40104 122 aa0.96□□□□□ -2.26
SCC2YDR180W PMT6P42934 759 aa0.96□□□□□ -2.26
SCC2YDR180W YFL064CP43540 174 aa0.96□□□□□ -2.26
SCC2YDR180W ASG7P46993 209 aa0.96□□□□□ -2.26
SCC2YDR180W MRX5P47007 382 aa0.96□□□□□ -2.26
SCC2YDR180W PET130P47065 347 aa0.96□□□□□ -2.26
SCC2YDR180W YJR056CP47115 236 aa0.96□□□□□ -2.26
SCC2YDR180W UFD1P53044 361 aa0.96□□□□□ -2.26
SCC2YDR180W STR3P53101 465 aaKnown RBP0.96□□□□□ -2.26
SCC2YDR180W BUD17P53727 317 aa0.96□□□□□ -2.26
SCC2YDR180W CSL4P53859 292 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms