RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	YDL114W	Q07530	308 aa		4.85	□□□□□ -1.63
SIR2	YDL042C	CMS1	Q07897	291 aa	Known RBP	4.85	□□□□□ -1.63
SIR2	YDL042C	PCL9	Q12477	304 aa		4.85	□□□□□ -1.63
SIR2	YDL042C	LCP5	P40079	357 aa	Predicted RBP	4.84	□□□□□ -1.63
SIR2	YDL042C	SEC9	P40357	651 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	EGT2	P42835	1041 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	SDT1	P53078	280 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	SHS1	Q07657	551 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	GAT3	Q07928	141 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	PLP2	Q12017	286 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	GLE1	Q12315	538 aa		4.84	□□□□□ -1.63
SIR2	YDL042C	WTM1	Q12363	437 aa	Known RBP	4.84	□□□□□ -1.63
SIR2	YDL042C	HMX1	P32339	317 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	BNS1	P50084	137 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	CLD1	P53264	445 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	CRH1	P53301	507 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	AIM45	Q12480	344 aa	Known RBP	4.83	□□□□□ -1.64
SIR2	YDL042C	PRR1	P28708	518 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	VAM7	P32912	316 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	YNL050C	P53952	270 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	RRB1	Q04225	511 aa	Known RBP	4.83	□□□□□ -1.64
SIR2	YDL042C	RBD2	Q12270	262 aa		4.83	□□□□□ -1.64
SIR2	YDL042C	RPS16A	P0CX51	143 aa	Known RBP	4.82	□□□□□ -1.64
SIR2	YDL042C	RPS16B	P0CX52	143 aa	Known RBP	4.82	□□□□□ -1.64
SIR2	YDL042C	GRR1	P24814	1151 aa		4.82	□□□□□ -1.64
SIR2	YDL042C	FUN26	P31381	517 aa		4.82	□□□□□ -1.64
SIR2	YDL042C	SSE1	P32589	693 aa	Known RBP	4.82	□□□□□ -1.64
SIR2	YDL042C	SPO23	P33757	523 aa		4.82	□□□□□ -1.64
SIR2	YDL042C	RTC2	P38279	296 aa		4.82	□□□□□ -1.64
SIR2	YDL042C	PTI1	P39927	425 aa	Predicted RBP	4.82	□□□□□ -1.64
SIR2	YDL042C	YNL208W	P40159	199 aa	Known RBP	4.82	□□□□□ -1.64
SIR2	YDL042C	SHE4	P51534	789 aa		4.82	□□□□□ -1.64
SIR2	YDL042C	LYS2	P07702	1392 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	YOX1	P34161	385 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	POP2	P39008	433 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	ATG18	P43601	500 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	HST1	P53685	503 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
SIR2	YDL042C	ALE1	Q08548	619 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	YDL199C	Q12407	687 aa		4.81	□□□□□ -1.64
SIR2	YDL042C	UTP10	P42945	1769 aa	Known RBP	4.81	□□□□□ -1.64
SIR2	YDL042C	ANR2	P36090	516 aa	Predicted RBP	4.8	□□□□□ -1.64
SIR2	YDL042C	MIG3	P39943	394 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	RTR1	P40084	226 aa	Predicted RBP	4.8	□□□□□ -1.64
SIR2	YDL042C	UTP18	P40362	594 aa	Predicted RBP	4.8	□□□□□ -1.64
SIR2	YDL042C	EAF6	P47128	113 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	SMP3	Q04174	516 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	YLH47	Q06493	454 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	ARR1	Q06596	294 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	MFG1	Q07684	458 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	NAG1	Q8TGN9	163 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	REV1	P12689	985 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	PRE5	P40302	234 aa	Known RBP	4.8	□□□□□ -1.64
SIR2	YDL042C	YMR027W	Q04371	470 aa		4.8	□□□□□ -1.64
SIR2	YDL042C	TMC1	Q08422	150 aa	Predicted RBP	4.8	□□□□□ -1.64
SIR2	YDL042C	CKI1	P20485	582 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	AAT2	P23542	418 aa	Known RBP	4.79	□□□□□ -1.64
SIR2	YDL042C	HXT2	P23585	541 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	HXT1	P32465	570 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	YHR122W	P38829	231 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	OXA1	P39952	402 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	YMR010W	Q03687	405 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	YOL075C	Q08234	1294 aa		4.79	□□□□□ -1.64
SIR2	YDL042C	STF1	P01098	86 aa		4.78	□□□□□ -1.64
SIR2	YDL042C	GAB1	P41733	394 aa		4.78	□□□□□ -1.64
SIR2	YDL042C	YHC3	P47040	408 aa		4.78	□□□□□ -1.64
SIR2	YDL042C	MPP10	P47083	593 aa	Known RBP	4.78	□□□□□ -1.64
SIR2	YDL042C	SHY1	P53266	389 aa		4.78	□□□□□ -1.64
SIR2	YDL042C	SPH1	Q06160	661 aa		4.78	□□□□□ -1.64
SIR2	YDL042C	DET1	Q99288	334 aa	Known RBP	4.78	□□□□□ -1.64
SIR2	YDL042C	RPS18A	P0CX55	146 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	RPS18B	P0CX56	146 aa	Predicted RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	LDB16	P25587	256 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	RPL16A	P26784	199 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	NUP2	P32499	720 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	YHR182W	P38870	785 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	CIN2	P46670	268 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	CTK3	P46963	296 aa	Predicted RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	TRF5	P48561	642 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	REX2	P54964	269 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	ZUO1	P32527	433 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	BAT1	P38891	393 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	ALP1	P38971	573 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	AIP1	P46680	615 aa	Known RBP	4.77	□□□□□ -1.65
SIR2	YDL042C	LST7	P53237	242 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	YET2	Q04210	160 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	MHR1	Q06630	226 aa		4.77	□□□□□ -1.65
SIR2	YDL042C	FAR1	P21268	830 aa		4.76	□□□□□ -1.65
SIR2	YDL042C	NAT4	Q04751	285 aa		4.76	□□□□□ -1.65
SIR2	YDL042C	LIP2	Q06005	328 aa		4.76	□□□□□ -1.65
SIR2	YDL042C	YDL144C	Q07589	356 aa		4.76	□□□□□ -1.65
SIR2	YDL042C	APC5	Q08683	685 aa		4.76	□□□□□ -1.65
SIR2	YDL042C	REX3	Q12090	404 aa		4.76	□□□□□ -1.65
SIR2	YDL042C	CHA1	P25379	360 aa	Known RBP	4.75	□□□□□ -1.65
SIR2	YDL042C	MXR2	P25566	168 aa		4.75	□□□□□ -1.65
SIR2	YDL042C	YER186C	P40101	306 aa		4.75	□□□□□ -1.65
SIR2	YDL042C	YHC1	Q05900	231 aa	Known RBP	4.75	□□□□□ -1.65
SIR2	YDL042C	HMS1	Q12398	434 aa		4.75	□□□□□ -1.65
SIR2	YDL042C	SSK22	P25390	1331 aa	Predicted RBP	4.75	□□□□□ -1.65
SIR2	YDL042C	YLL053C	P0CD98	152 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms