RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeast

Gene RER1, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RER1	YCL001W	YGR266W	P53326	701 aa		4.11	□□□□□ -1.75
RER1	YCL001W	YOL159C	Q08300	171 aa		4.11	□□□□□ -1.75
RER1	YCL001W	HUA2	Q12134	243 aa		4.11	□□□□□ -1.75
RER1	YCL001W	YPR011C	Q12251	326 aa		4.11	□□□□□ -1.75
RER1	YCL001W	INP53	Q12271	1107 aa		4.11	□□□□□ -1.75
RER1	YCL001W	HSP42	Q12329	375 aa		4.11	□□□□□ -1.75
RER1	YCL001W	MHT1	Q12525	324 aa		4.11	□□□□□ -1.75
RER1	YCL001W	YBR126W-A	Q8TGU7	68 aa		4.11	□□□□□ -1.75
RER1	YCL001W	GCN1	P33892	2672 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	BCY1	P07278	416 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	HOM3	P10869	527 aa		4.1	□□□□□ -1.75
RER1	YCL001W	PWP1	P21304	576 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	YCK1	P23291	538 aa		4.1	□□□□□ -1.75
RER1	YCL001W	VMA16	P23968	213 aa		4.1	□□□□□ -1.75
RER1	YCL001W	SLM5	P25345	492 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	COX13	P32799	129 aa		4.1	□□□□□ -1.75
RER1	YCL001W	SNU114	P36048	1008 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	AUR1	P36107	401 aa	Predicted RBP	4.1	□□□□□ -1.75
RER1	YCL001W	AVT5	P38176	459 aa		4.1	□□□□□ -1.75
RER1	YCL001W	BMT2	P38278	337 aa		4.1	□□□□□ -1.75
RER1	YCL001W	SEC27	P41811	889 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	YRB1	P41920	201 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	FAR3	P46671	204 aa		4.1	□□□□□ -1.75
RER1	YCL001W	NAS6	P50086	228 aa		4.1	□□□□□ -1.75
RER1	YCL001W	GTR2	P53290	341 aa		4.1	□□□□□ -1.75
RER1	YCL001W	LSM3	P57743	89 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	SED5	Q01590	340 aa		4.1	□□□□□ -1.75
RER1	YCL001W	MRS2	Q01926	470 aa		4.1	□□□□□ -1.75
RER1	YCL001W	RIF2	Q06208	395 aa		4.1	□□□□□ -1.75
RER1	YCL001W	APC9	Q12107	265 aa		4.1	□□□□□ -1.75
RER1	YCL001W	YPL245W	Q12179	454 aa	Known RBP	4.1	□□□□□ -1.75
RER1	YCL001W	SRN2	Q99176	213 aa		4.1	□□□□□ -1.75
RER1	YCL001W	MRS3	P10566	314 aa		4.09	□□□□□ -1.75
RER1	YCL001W	CBS2	P14905	389 aa		4.09	□□□□□ -1.75
RER1	YCL001W	OCA4	P25366	362 aa		4.09	□□□□□ -1.75
RER1	YCL001W	SIN4	P32259	974 aa		4.09	□□□□□ -1.75
RER1	YCL001W	ASC1	P38011	319 aa	Known RBP	4.09	□□□□□ -1.75
RER1	YCL001W	MNL1	P38888	796 aa		4.09	□□□□□ -1.75
RER1	YCL001W	FAU1	P40099	211 aa		4.09	□□□□□ -1.75
RER1	YCL001W	HOC1	P47124	396 aa		4.09	□□□□□ -1.75
RER1	YCL001W	DIA3	P52290	468 aa		4.09	□□□□□ -1.75
RER1	YCL001W	TVP15	Q03860	143 aa		4.09	□□□□□ -1.75
RER1	YCL001W	YMR111C	Q04461	462 aa	Predicted RBP	4.09	□□□□□ -1.75
RER1	YCL001W	SFH1	Q06168	426 aa		4.09	□□□□□ -1.75
RER1	YCL001W	NMD4	Q12129	218 aa		4.09	□□□□□ -1.75
RER1	YCL001W	ATG34	Q12292	412 aa		4.09	□□□□□ -1.75
RER1	YCL001W	GLE1	Q12315	538 aa		4.09	□□□□□ -1.75
RER1	YCL001W	NOT5	Q12514	560 aa	Predicted RBP	4.09	□□□□□ -1.75
RER1	YCL001W	YKL068W-A	Q3E826	78 aa		4.09	□□□□□ -1.75
RER1	YCL001W	YCL012C	Q8J0M4	134 aa		4.09	□□□□□ -1.75
RER1	YCL001W	URA4	P20051	364 aa		4.08	□□□□□ -1.76
RER1	YCL001W	DBR1	P24309	405 aa	Known RBP	4.08	□□□□□ -1.76
RER1	YCL001W	TRX3	P25372	127 aa		4.08	□□□□□ -1.76
RER1	YCL001W	LDB16	P25587	256 aa		4.08	□□□□□ -1.76
RER1	YCL001W	ERG1	P32476	496 aa	Known RBP	4.08	□□□□□ -1.76
RER1	YCL001W	YDR089W	P38966	869 aa		4.08	□□□□□ -1.76
RER1	YCL001W	YJL068C	P40363	299 aa		4.08	□□□□□ -1.76
RER1	YCL001W	MET18	P40469	1032 aa		4.08	□□□□□ -1.76
RER1	YCL001W	ELP2	P42935	788 aa		4.08	□□□□□ -1.76
RER1	YCL001W	IBA57	P47158	497 aa		4.08	□□□□□ -1.76
RER1	YCL001W	YJR154W	P47181	346 aa		4.08	□□□□□ -1.76
RER1	YCL001W	ECM11	Q04110	302 aa		4.08	□□□□□ -1.76
RER1	YCL001W	YLR413W	Q06689	675 aa		4.08	□□□□□ -1.76
RER1	YCL001W	TEN1	Q07921	160 aa		4.08	□□□□□ -1.76
RER1	YCL001W	YOL024W	Q08172	172 aa		4.08	□□□□□ -1.76
RER1	YCL001W	NOP58	Q12499	511 aa	Known RBP	4.08	□□□□□ -1.76
RER1	YCL001W	ART10	P18634	518 aa	Known RBP	4.07	□□□□□ -1.76
RER1	YCL001W	SGV1	P23293	657 aa	Known RBP	4.07	□□□□□ -1.76
RER1	YCL001W	POL4	P25615	582 aa		4.07	□□□□□ -1.76
RER1	YCL001W	BUB2	P26448	306 aa	Predicted RBP	4.07	□□□□□ -1.76
RER1	YCL001W	FRE2	P36033	711 aa		4.07	□□□□□ -1.76
RER1	YCL001W	CAF4	P36130	643 aa		4.07	□□□□□ -1.76
RER1	YCL001W	SPC34	P36131	295 aa		4.07	□□□□□ -1.76
RER1	YCL001W	YCR087C-A	P37263	153 aa		4.07	□□□□□ -1.76
RER1	YCL001W	MDM31	P38880	579 aa		4.07	□□□□□ -1.76
RER1	YCL001W	UTP9	P38882	575 aa	Known RBP	4.07	□□□□□ -1.76
RER1	YCL001W	PRP39	P39682	629 aa	Known RBP	4.07	□□□□□ -1.76
RER1	YCL001W	FRT2	P39734	528 aa		4.07	□□□□□ -1.76
RER1	YCL001W	YIL060W	P40519	144 aa		4.07	□□□□□ -1.76
RER1	YCL001W	PRM10	P42946	383 aa		4.07	□□□□□ -1.76
RER1	YCL001W	YPT32	P51996	222 aa	Known RBP	4.07	□□□□□ -1.76
RER1	YCL001W	TAF6	P53040	516 aa		4.07	□□□□□ -1.76
RER1	YCL001W	SDT1	P53078	280 aa		4.07	□□□□□ -1.76
RER1	YCL001W	ROG1	P53118	685 aa		4.07	□□□□□ -1.76
RER1	YCL001W	NOP19	P53317	196 aa	Predicted RBP	4.07	□□□□□ -1.76
RER1	YCL001W	IRC15	Q02733	499 aa		4.07	□□□□□ -1.76
RER1	YCL001W	PEX25	Q02969	394 aa		4.07	□□□□□ -1.76
RER1	YCL001W	YDR124W	Q04608	324 aa		4.07	□□□□□ -1.76
RER1	YCL001W	REX4	Q08237	289 aa		4.07	□□□□□ -1.76
RER1	YCL001W	LEU4	P06208	619 aa	Known RBP	4.06	□□□□□ -1.76
RER1	YCL001W	COS2	P0CX12	379 aa		4.06	□□□□□ -1.76
RER1	YCL001W	COS3	P0CX13	379 aa		4.06	□□□□□ -1.76
RER1	YCL001W	GCD2	P12754	651 aa	Predicted RBP	4.06	□□□□□ -1.76
RER1	YCL001W	ADH7	P25377	361 aa		4.06	□□□□□ -1.76
RER1	YCL001W	SPB1	P25582	841 aa	Predicted RBP	4.06	□□□□□ -1.76
RER1	YCL001W	TAH1	P25638	111 aa	Predicted RBP	4.06	□□□□□ -1.76
RER1	YCL001W	SUI1	P32911	108 aa	Known RBP	4.06	□□□□□ -1.76
RER1	YCL001W	LOS1	P33418	1100 aa	Predicted RBP	4.06	□□□□□ -1.76
RER1	YCL001W	DOA1	P36037	715 aa		4.06	□□□□□ -1.76
RER1	YCL001W	MIA40	P36046	403 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms