RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	APC2	Q12440	853 aa		3.19	□□□□□ -1.9
UBS1	YBR165W	STE2	D6VTK4	431 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	RPL6B	P05739	176 aa	Known RBP	3.18	□□□□□ -1.9
UBS1	YBR165W	RPS16A	P0CX51	143 aa	Known RBP	3.18	□□□□□ -1.9
UBS1	YBR165W	RPS16B	P0CX52	143 aa	Known RBP	3.18	□□□□□ -1.9
UBS1	YBR165W	CKA2	P19454	339 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	GDT1	P38301	280 aa	Predicted RBP	3.18	□□□□□ -1.9
UBS1	YBR165W	YPT35	P38815	214 aa	Known RBP	3.18	□□□□□ -1.9
UBS1	YBR165W	UFE1	P41834	346 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	MOB2	P43563	287 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	YJR030C	P47101	745 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	LST7	P53237	242 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	RPL6A	Q02326	176 aa	Known RBP	3.18	□□□□□ -1.9
UBS1	YBR165W	MRX8	Q05473	314 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	YOL075C	Q08234	1294 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	FSH3	Q99369	266 aa		3.18	□□□□□ -1.9
UBS1	YBR165W	RPS14A	P06367	137 aa	Known RBP	3.17	□□□□□ -1.9
UBS1	YBR165W	GRR1	P24814	1151 aa		3.17	□□□□□ -1.9
UBS1	YBR165W	PEX5	P35056	612 aa		3.17	□□□□□ -1.9
UBS1	YBR165W	RPS14B	P39516	138 aa	Known RBP	3.17	□□□□□ -1.9
UBS1	YBR165W	SEC28	P40509	296 aa	Known RBP	3.17	□□□□□ -1.9
UBS1	YBR165W	AIM33	Q04516	312 aa		3.17	□□□□□ -1.9
UBS1	YBR165W	ALE1	Q08548	619 aa		3.17	□□□□□ -1.9
UBS1	YBR165W	ERP4	Q12450	207 aa		3.17	□□□□□ -1.9
UBS1	YBR165W	AIM45	Q12480	344 aa	Known RBP	3.17	□□□□□ -1.9
UBS1	YBR165W	FAA1	P30624	700 aa	Known RBP	3.16	□□□□□ -1.9
UBS1	YBR165W	SPO73	P40031	143 aa		3.16	□□□□□ -1.9
UBS1	YBR165W	INP2	Q03824	705 aa		3.16	□□□□□ -1.9
UBS1	YBR165W	SCH9	P11792	824 aa	Known RBP	3.15	□□□□□ -1.91
UBS1	YBR165W	EFM1	P38732	585 aa		3.15	□□□□□ -1.91
UBS1	YBR165W	SNL1	P40548	159 aa		3.15	□□□□□ -1.91
UBS1	YBR165W	MPS2	P53159	387 aa		3.15	□□□□□ -1.91
UBS1	YBR165W	YOL029C	Q08187	201 aa		3.15	□□□□□ -1.91
UBS1	YBR165W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.15	□□□□□ -1.91
UBS1	YBR165W	BGL2	P15703	313 aa	Known RBP	3.14	□□□□□ -1.91
UBS1	YBR165W	AST1	P35183	429 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	YSW1	P38280	609 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	ATG7	P38862	630 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	RBG1	P39729	369 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	COS4	P43542	379 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	RPN14	P53196	417 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	YNR068C	P53754	272 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	VTI1	Q04338	217 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	APC4	Q04601	652 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	MMT2	Q08970	484 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	YDR018C	Q12185	396 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	SKS1	Q12505	502 aa		3.14	□□□□□ -1.91
UBS1	YBR165W	DAP2	P18962	818 aa		3.13	□□□□□ -1.91
UBS1	YBR165W	UBA1	P22515	1024 aa	Known RBP	3.13	□□□□□ -1.91
UBS1	YBR165W	JEM1	P40358	645 aa		3.13	□□□□□ -1.91
UBS1	YBR165W	NAS6	P50086	228 aa		3.13	□□□□□ -1.91
UBS1	YBR165W	SFG1	Q12507	346 aa		3.13	□□□□□ -1.91
UBS1	YBR165W	THR4	P16120	514 aa	Known RBP	3.12	□□□□□ -1.91
UBS1	YBR165W	CKI1	P20485	582 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	COX10	P21592	462 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	URA10	P30402	227 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	SKG6	P32900	734 aa	Predicted RBP	3.12	□□□□□ -1.91
UBS1	YBR165W	SRB2	P34162	210 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	IST2	P38250	946 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	LSG1	P53145	640 aa	Known RBP	3.12	□□□□□ -1.91
UBS1	YBR165W	PRM1	P53835	661 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	DIA1	P54005	336 aa		3.12	□□□□□ -1.91
UBS1	YBR165W	UTP6	Q02354	440 aa	Known RBP	3.12	□□□□□ -1.91
UBS1	YBR165W	RPN8	Q08723	338 aa	Known RBP	3.12	□□□□□ -1.91
UBS1	YBR165W	ARF2	P19146	181 aa	Known RBP	3.11	□□□□□ -1.91
UBS1	YBR165W	PTK1	P36002	662 aa	Predicted RBP	3.11	□□□□□ -1.91
UBS1	YBR165W	CSM3	Q04659	317 aa		3.11	□□□□□ -1.91
UBS1	YBR165W	RDS1	P25611	832 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	MKK1	P32490	508 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	MRPS5	P33759	307 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	BDH1	P39714	382 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	YNL320W	P42840	284 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	YFR018C	P43599	363 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	SMP3	Q04174	516 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	TAF10	Q12030	206 aa		3.1	□□□□□ -1.91
UBS1	YBR165W	MAS1	P10507	462 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
UBS1	YBR165W	YKL071W	P36086	256 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	DAD2	P36162	133 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	TAE1	P38340	232 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	YHR122W	P38829	231 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	GMC1	Q04399	608 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	FAR10	Q06001	478 aa		3.09	□□□□□ -1.91
UBS1	YBR165W	FLO11	P08640	1367 aa		3.09	□□□□□ -1.92
UBS1	YBR165W	MXR2	P25566	168 aa		3.08	□□□□□ -1.92
UBS1	YBR165W	HMX1	P32339	317 aa		3.08	□□□□□ -1.92
UBS1	YBR165W	YCH1	P42937	148 aa		3.08	□□□□□ -1.92
UBS1	YBR165W	NAT4	Q04751	285 aa		3.08	□□□□□ -1.92
UBS1	YBR165W	YDL211C	Q12121	372 aa		3.08	□□□□□ -1.92
UBS1	YBR165W	RPN6	Q12377	434 aa		3.08	□□□□□ -1.92
UBS1	YBR165W	PCH2	P38126	564 aa		3.07	□□□□□ -1.92
UBS1	YBR165W	RRG9	P40156	214 aa		3.07	□□□□□ -1.92
UBS1	YBR165W	YHC3	P47040	408 aa		3.07	□□□□□ -1.92
UBS1	YBR165W	SMD1	Q02260	146 aa	Predicted RBP	3.07	□□□□□ -1.92
UBS1	YBR165W	APC5	Q08683	685 aa		3.07	□□□□□ -1.92
UBS1	YBR165W	YOR012W	Q12351	137 aa		3.07	□□□□□ -1.92
UBS1	YBR165W	VPS63	O13549	108 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	CUP2	P15315	225 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	UTR1	P21373	530 aa		3.06	□□□□□ -1.92
UBS1	YBR165W	ERG9	P29704	444 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 98.9 ms