RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	GIP3	Q03016	1276 aa		13.51	□□□□□ -0.25
SSA3	YBL075C	EAR1	Q03212	550 aa		13.51	□□□□□ -0.25
SSA3	YBL075C	YMR087W	Q04299	284 aa		13.51	□□□□□ -0.25
SSA3	YBL075C	AKR2	Q12013	749 aa		13.51	□□□□□ -0.25
SSA3	YBL075C	YPR145C-A	Q2V2P0	78 aa		13.51	□□□□□ -0.25
SSA3	YBL075C	URK1	P27515	501 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	ATG8	P38182	117 aa	RIP-Chip data	13.5	□□□□□ -0.25	not detected
SSA3	YBL075C	GND1	P38720	489 aa	Known RBP	13.5	□□□□□ -0.25
SSA3	YBL075C	YIR007W	P40566	764 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	VBA1	Q04301	562 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	VID22	Q05934	901 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	ANT1	Q06497	328 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	YPR084W	Q06821	456 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	NUS1	Q12063	375 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	YPL066W	Q12194	479 aa		13.5	□□□□□ -0.25
SSA3	YBL075C	NAM2	P11325	894 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	SKT5	P34226	696 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	TCM62	P38228	572 aa	Known RBP	13.49	□□□□□ -0.25
SSA3	YBL075C	BIT2	P38346	545 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	TSL1	P38427	1098 aa	Known RBP	13.49	□□□□□ -0.25
SSA3	YBL075C	ALP1	P38971	573 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	FKH2	P41813	862 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	MRPS17	Q03246	237 aa	Predicted RBP	13.49	□□□□□ -0.25
SSA3	YBL075C	HOF1	Q05080	669 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	CAR2	P07991	424 aa	Known RBP	13.49	□□□□□ -0.25
SSA3	YBL075C	TMA19	P35691	167 aa	Known RBP	13.49	□□□□□ -0.25
SSA3	YBL075C	PTC7	P38797	343 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	GAB1	P41733	394 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	GTO1	P48239	356 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	YPL245W	Q12179	454 aa	Known RBP	13.49	□□□□□ -0.25
SSA3	YBL075C	RMD5	Q12508	421 aa		13.49	□□□□□ -0.25
SSA3	YBL075C	SIR2	P06700	562 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	ERD1	P16151	362 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	STE50	P25344	346 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	RSC6	P25632	483 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	YBR284W	P38150	797 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	SLX8	P40072	274 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	PAN6	P40459	309 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	YMR265C	Q03508	461 aa	Known RBP	13.48	□□□□□ -0.25
SSA3	YBL075C	RUB1	Q03919	77 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	GPM2	Q12008	311 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	YOR114W	Q12219	294 aa		13.48	□□□□□ -0.25
SSA3	YBL075C	AHA1	Q12449	350 aa	Known RBP	13.48	□□□□□ -0.25
SSA3	YBL075C	RAS2	P01120	322 aa	Known RBP	13.47	□□□□□ -0.25
SSA3	YBL075C	YCP4	P25349	247 aa	Known RBP	13.47	□□□□□ -0.25
SSA3	YBL075C	CHK1	P38147	527 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	POG1	P40473	351 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	CDC1	P40986	491 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	UFE1	P41834	346 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	COS10	P52924	374 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	ARG5,6	Q01217	863 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	SEN15	Q04675	128 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	DCR2	Q05924	578 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	YLR446W	Q06204	433 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	RPC40	P07703	335 aa	Known RBP	13.47	□□□□□ -0.25
SSA3	YBL075C	YPK2	P18961	677 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	PDE1	P22434	369 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	MRPL15	P36523	253 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	YER010C	P40011	234 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	LAS21	P40367	830 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	SPR28	Q04921	423 aa		13.47	□□□□□ -0.25
SSA3	YBL075C	MRI1	Q06489	411 aa	Known RBP	13.47	□□□□□ -0.25
SSA3	YBL075C	EFG1	Q3E705	233 aa	Known RBP	13.47	□□□□□ -0.25
SSA3	YBL075C	CDC7	P06243	507 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	HOM3	P10869	527 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	OAC1	P32332	324 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	TKL2	P33315	681 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	SEF1	P34228	1148 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	ASC1	P38011	319 aa	Known RBP	13.46	□□□□□ -0.25
SSA3	YBL075C	PKP1	P40530	394 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	13.46	□□□□□ -0.25	not detected
SSA3	YBL075C	LEA1	Q08963	238 aa	Predicted RBP	13.46	□□□□□ -0.25
SSA3	YBL075C	SNF8	Q12483	233 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	MPD2	Q99316	277 aa		13.46	□□□□□ -0.25
SSA3	YBL075C	HXK2	P04807	486 aa	Known RBP	13.45	□□□□□ -0.26
SSA3	YBL075C	MRPL9	P31334	269 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	MRP20	P32387	263 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	HMT1	P38074	348 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	SHE3	P38272	425 aa	Known RBP	13.45	□□□□□ -0.26
SSA3	YBL075C	BMT5	P40493	336 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	LOH1	P47055	219 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	BOL2	P53082	120 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	GPG1	P53130	126 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	RAD28	Q12021	506 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	ERG27	Q12452	347 aa	Known RBP	13.45	□□□□□ -0.26
SSA3	YBL075C	ERD2	P18414	219 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	OAR1	P35731	278 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	MAL32	P38158	584 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	MAP2	P38174	421 aa	Known RBP	13.45	□□□□□ -0.26
SSA3	YBL075C	HAT2	P39984	401 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	TAX4	P47030	604 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	MAL12	P53341	584 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	YML083C	Q04526	418 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	AGC1	Q12482	902 aa		13.45	□□□□□ -0.26
SSA3	YBL075C	TFS1	P14306	219 aa		13.44	□□□□□ -0.26
SSA3	YBL075C	ARE1	P25628	610 aa		13.44	□□□□□ -0.26
SSA3	YBL075C	YBR013C	P38215	129 aa		13.44	□□□□□ -0.26
SSA3	YBL075C	SNG1	P46950	547 aa		13.44	□□□□□ -0.26
SSA3	YBL075C	SDT1	P53078	280 aa		13.44	□□□□□ -0.26
SSA3	YBL075C	YGL117W	P53133	265 aa		13.44	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms