RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 POP1P41812 875 aa8.07□□□□□ -1.12
LSR1LSR1 MID1P41821 548 aa8.07□□□□□ -1.12
LSR1LSR1 MRPS18P42847 217 aa8.07□□□□□ -1.12
LSR1LSR1 GNP1P48813 663 aa8.07□□□□□ -1.12
LSR1LSR1 TOS2P50078 622 aa8.07□□□□□ -1.12
LSR1LSR1 YHM2Q04013 314 aa8.07□□□□□ -1.12
LSR1LSR1 YMR130WQ04223 302 aa8.07□□□□□ -1.12
LSR1LSR1 PLM2Q04383 521 aa8.07□□□□□ -1.12
LSR1LSR1 FEX2Q08991 375 aa8.07□□□□□ -1.12
LSR1LSR1 YOR283WQ12040 230 aaKnown RBP8.07□□□□□ -1.12
LSR1LSR1 PUS9Q12069 462 aa8.07□□□□□ -1.12
LSR1LSR1 PCL9Q12477 304 aa8.07□□□□□ -1.12
LSR1LSR1 MTR10Q99189 972 aa8.07□□□□□ -1.12
LSR1LSR1 GCN4P03069 281 aa8.06□□□□□ -1.12
LSR1LSR1 HIS3P06633 220 aa8.06□□□□□ -1.12
LSR1LSR1 SPS2P08459 502 aa8.06□□□□□ -1.12
LSR1LSR1 PDR3P33200 976 aa8.06□□□□□ -1.12
LSR1LSR1 ARC19P33204 171 aaKnown RBP8.06□□□□□ -1.12
LSR1LSR1 YKL151CP36059 337 aa8.06□□□□□ -1.12
LSR1LSR1 TRM7P38238 310 aaKnown RBP8.06□□□□□ -1.12
LSR1LSR1 NEM1P38757 446 aa8.06□□□□□ -1.12
LSR1LSR1 PTH1P38876 190 aaKnown RBP8.06□□□□□ -1.12
LSR1LSR1 CHL4P38907 458 aa8.06□□□□□ -1.12
LSR1LSR1 NAB3P38996 802 aaKnown RBP RIP-Chip data8.06□□□□□ -1.12not detected
LSR1LSR1 HPA3P39979 161 aa8.06□□□□□ -1.12
LSR1LSR1 YNL195CP40168 261 aa8.06□□□□□ -1.12
LSR1LSR1 MNT4P53745 580 aa8.06□□□□□ -1.12
LSR1LSR1 HXT11P54862 567 aa8.06□□□□□ -1.12
LSR1LSR1 DLT1Q04216 342 aa8.06□□□□□ -1.12
LSR1LSR1 ISR1Q06098 443 aaKnown RBP8.06□□□□□ -1.12
LSR1LSR1 XYL2Q07993 356 aa8.06□□□□□ -1.12
LSR1LSR1 CRT10Q08226 957 aa8.06□□□□□ -1.12
LSR1LSR1 YOR289WQ12012 251 aaPredicted RBP8.06□□□□□ -1.12
LSR1LSR1 ATG41Q12048 136 aa8.06□□□□□ -1.12
LSR1LSR1 TPO4Q12256 659 aa8.06□□□□□ -1.12
LSR1LSR1 DPM1P14020 267 aaKnown RBP8.05□□□□□ -1.12
LSR1LSR1 CBS1P14066 229 aa8.05□□□□□ -1.12
LSR1LSR1 HOP1P20050 605 aa8.05□□□□□ -1.12
LSR1LSR1 APN1P22936 367 aa8.05□□□□□ -1.12
LSR1LSR1 CPR3P25719 182 aa8.05□□□□□ -1.12
LSR1LSR1 LST4P34239 828 aa8.05□□□□□ -1.12
LSR1LSR1 TMA19P35691 167 aaKnown RBP8.05□□□□□ -1.12
LSR1LSR1 TEF4P36008 412 aaKnown RBP8.05□□□□□ -1.12
LSR1LSR1 YKL077WP36081 392 aa8.05□□□□□ -1.12
LSR1LSR1 CCZ1P38273 704 aa8.05□□□□□ -1.12
LSR1LSR1 RRP4P38792 359 aaKnown RBP8.05□□□□□ -1.12
LSR1LSR1 NEO1P40527 1151 aa8.05□□□□□ -1.12
LSR1LSR1 TIM54P47045 478 aa8.05□□□□□ -1.12
LSR1LSR1 UBC12P52491 188 aa8.05□□□□□ -1.12
LSR1LSR1 PGA1P53896 198 aa8.05□□□□□ -1.12
LSR1LSR1 RPL6AQ02326 176 aaKnown RBP8.05□□□□□ -1.12
LSR1LSR1 YPL068CQ02749 293 aa8.05□□□□□ -1.12
LSR1LSR1 YDR541CQ03049 344 aa8.05□□□□□ -1.12
LSR1LSR1 MTQ2Q03920 221 aaPredicted RBP8.05□□□□□ -1.12
LSR1LSR1 IPK1Q06667 281 aa8.05□□□□□ -1.12
LSR1LSR1 RPS21BQ3E754 87 aaKnown RBP8.05□□□□□ -1.12
LSR1LSR1 URA3P03962 267 aa8.04□□□□□ -1.12
LSR1LSR1 RAD52P06778 471 aaKnown RBP8.04□□□□□ -1.12
LSR1LSR1 RPB5P20434 215 aa8.04□□□□□ -1.12
LSR1LSR1 SCL1P21243 252 aaKnown RBP8.04□□□□□ -1.12
LSR1LSR1 PUP1P25043 261 aa8.04□□□□□ -1.12
LSR1LSR1 AGP1P25376 633 aa8.04□□□□□ -1.12
LSR1LSR1 AHC2P25649 128 aa8.04□□□□□ -1.12
LSR1LSR1 CAM1P29547 415 aaKnown RBP8.04□□□□□ -1.12
LSR1LSR1 SSH4P32343 579 aa8.04□□□□□ -1.12
LSR1LSR1 KRE6P32486 720 aa8.04□□□□□ -1.12
LSR1LSR1 MSS1P32559 526 aaPredicted RBP8.04□□□□□ -1.12
LSR1LSR1 PUB1P32588 453 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
LSR1LSR1 MSS4P38994 779 aa8.04□□□□□ -1.12
LSR1LSR1 SPT20P50875 604 aa8.04□□□□□ -1.12
LSR1LSR1 COS10P52924 374 aa8.04□□□□□ -1.12
LSR1LSR1 PPT1P53043 513 aa8.04□□□□□ -1.12
LSR1LSR1 SNO2P53823 222 aa8.04□□□□□ -1.12
LSR1LSR1 HLR1Q04429 423 aa8.04□□□□□ -1.12
LSR1LSR1 NAT4Q04751 285 aa8.04□□□□□ -1.12
LSR1LSR1 YDL211CQ12121 372 aa8.04□□□□□ -1.12
LSR1LSR1 TIR4Q12218 487 aaPredicted RBP8.04□□□□□ -1.12
LSR1LSR1 YDL007C-AQ2V2Q0 85 aa8.04□□□□□ -1.12
LSR1LSR1 YLR099W-AQ3E798 87 aa8.04□□□□□ -1.12
LSR1LSR1 YKL033W-AQ86ZR7 236 aa8.04□□□□□ -1.12
LSR1LSR1 NAG1Q8TGN9 163 aa8.04□□□□□ -1.12
LSR1LSR1 MDM35O60200 86 aa8.03□□□□□ -1.12
LSR1LSR1 QCR7P00128 127 aa8.03□□□□□ -1.12
LSR1LSR1 PEP4P07267 405 aaKnown RBP8.03□□□□□ -1.12
LSR1LSR1 YGL041W-AP0C5N3 154 aa8.03□□□□□ -1.12
LSR1LSR1 DSF1P0CX08 502 aa8.03□□□□□ -1.12
LSR1LSR1 YNR073CP0CX09 502 aa8.03□□□□□ -1.12
LSR1LSR1 PHO80P20052 293 aa8.03□□□□□ -1.12
LSR1LSR1 NPR1P22211 790 aa8.03□□□□□ -1.12
LSR1LSR1 EXG1P23776 448 aaKnown RBP8.03□□□□□ -1.12
LSR1LSR1 YMC1P32331 307 aa8.03□□□□□ -1.12
LSR1LSR1 ORC2P32833 620 aa8.03□□□□□ -1.12
LSR1LSR1 ECM15P35195 104 aa8.03□□□□□ -1.12
LSR1LSR1 THI2P38141 450 aa8.03□□□□□ -1.12
LSR1LSR1 RPS20P38701 121 aaKnown RBP8.03□□□□□ -1.12
LSR1LSR1 YIL165CP40446 119 aa8.03□□□□□ -1.12
LSR1LSR1 RPE1P46969 238 aa8.03□□□□□ -1.12
LSR1LSR1 AAD10P47182 288 aa8.03□□□□□ -1.12
LSR1LSR1 PAU12P53343 120 aa8.03□□□□□ -1.12
LSR1LSR1 YKR011CQ02209 353 aa8.03□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms