RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 PLCB4Q15147 1175 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 SPECC1Q5M775 1068 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 KIAA0319Q5VV43 1072 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 FAM43BQ6ZT52 329 aaPredicted RBP13.11□□□□□ -0.31
MECP2-226ENST00000640414 LRRC43Q8N309 656 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 NME8Q8N427 588 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 IGDCC4Q8TDY8 1250 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 ELAC1Q9H777 363 aaKnown RBP13.11□□□□□ -0.31
MECP2-226ENST00000640414 RNF19AQ9NV58 838 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 LAMA4Q16363 1823 aa13.11□□□□□ -0.31
MECP2-226ENST00000640414 BAHCC1Q9P281 2608 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 FRYLO94915 3013 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 CXCL14O95715 111 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 RFX1P22670 979 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 MTHFD1LQ6UB35 978 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 GPR149Q86SP6 731 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 SLC39A11Q8N1S5 342 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 GPRASP2Q96D09 838 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 AGXT2Q9BYV1 514 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 RIOX1Q9H6W3 641 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 DLGAP2Q9P1A6 1054 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 IGSF9Q9P2J2 1179 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 RALYQ9UKM9 306 aaKnown RBP13.1□□□□□ -0.31
MECP2-226ENST00000640414 CA14Q9ULX7 337 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 SPTBN2O15020 2390 aa13.1□□□□□ -0.31
MECP2-226ENST00000640414 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
MECP2-226ENST00000640414 DCDC2BA2VCK2 349 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 POTEMA6NI47 508 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 IFIT3O14879 490 aaKnown RBP13.09□□□□□ -0.31
MECP2-226ENST00000640414 GPR182O15218 404 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 CYTH3O43739 400 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
MECP2-226ENST00000640414 ADRB1P08588 477 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 SDHBP21912 280 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 FGD1P98174 961 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 IFIT1BQ5T764 474 aaKnown RBP13.09□□□□□ -0.31
MECP2-226ENST00000640414 USP17L6PQ6QN14 398 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 C1orf210Q8IVY1 113 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 AUTS2Q8WXX7 1259 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 BRF1Q92994 677 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 TMEM87BQ96K49 555 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 NCDNQ9UBB6 729 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 TPCN1Q9ULQ1 816 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 LIMCH1Q9UPQ0 1083 aa13.09□□□□□ -0.31
MECP2-226ENST00000640414 CHD6Q8TD26 2715 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 USP24Q9UPU5 2620 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
MECP2-226ENST00000640414 HOXA2O43364 376 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 KINO60870 393 aaKnown RBP13.08□□□□□ -0.32
MECP2-226ENST00000640414 ITGB5P18084 799 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 MCM2P49736 904 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 DSC3Q14574 896 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 SEC23AQ15436 765 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
MECP2-226ENST00000640414 ODR4Q5SWX8 454 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 CABP7Q86V35 215 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 FAM228AQ86W67 206 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 KIAA0319LQ8IZA0 1049 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 MAML2Q8IZL2 1156 aaPredicted RBP13.08□□□□□ -0.32
MECP2-226ENST00000640414 TNPO1Q92973 898 aaKnown RBP13.08□□□□□ -0.32
MECP2-226ENST00000640414 CDHR1Q96JP9 859 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 UBAC1Q9BSL1 405 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 ZBP1Q9H171 429 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 LY9Q9HBG7 655 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 GPR179Q6PRD1 2367 aa13.08□□□□□ -0.32
MECP2-226ENST00000640414 C2orf16Q68DN1 1984 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 BAZ2BQ9UIF8 2168 aaKnown RBP13.07□□□□□ -0.32
MECP2-226ENST00000640414 NT5C1B-RDH14C9J2C7 533 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 N4BP1O75113 896 aaKnown RBP13.07□□□□□ -0.32
MECP2-226ENST00000640414 GLULP15104 373 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 LIFRP42702 1097 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 METAP2P50579 478 aaKnown RBP eCLIP13.07□□□□□ -0.32
MECP2-226ENST00000640414 EVCP57679 992 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 COL9A2Q14055 689 aaPredicted RBP13.07□□□□□ -0.32
MECP2-226ENST00000640414 LETM2Q2VYF4 491 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 PPP1R16BQ96T49 567 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 SFXN1Q9H9B4 322 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 CDV3Q9UKY7 258 aaKnown RBP13.07□□□□□ -0.32
MECP2-226ENST00000640414 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 SIT1Q9Y3P8 196 aa13.07□□□□□ -0.32
MECP2-226ENST00000640414 IRAK3Q9Y616 596 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms