RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 A0A087X0B3 334 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 SLC16A4O15374 487 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 GCNT3O95395 438 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 CYP11B2P19099 503 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 MDM2Q00987 491 aaPredicted RBP6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 STRN3Q13033 797 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 PPP2R5AQ15172 486 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 NFKBIBQ15653 356 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 TPD52L1Q16890 204 aaPredicted RBP6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 RINT1Q6NUQ1 792 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 TAF2Q6P1X5 1199 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 FAM178BQ8IXR5 827 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 GCOM2Q9BZD3 368 aaPredicted RBP6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 LMBRD1Q9NUN5 540 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 MAPK8IP1Q9UQF2 711 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 COL4A3BPQ9Y5P4 624 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 CDY2AQ9Y6F7 541 aa6.42□□□□□ -1.38
HNRNPU-220ENST00000639667 PLXNA1Q9UIW2 1896 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 A0A087WZ62 844 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 MYMKA6NI61 221 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 RPS6KA5O75582 802 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 SLFN14P0C7P3 912 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 TMEM119Q4V9L6 283 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 FAM117BQ6P1L5 589 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 NELFCDQ8IXH7 590 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 SYT2Q8N9I0 419 aaPredicted RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 FDXACB1Q9BRP7 624 aaPredicted RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 KIFC3Q9BVG8 833 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 APOL6Q9BWW8 343 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 DBR1Q9UK59 544 aaKnown RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 IGKV6D-21A0A0A0MT36 114 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 IGHA2P01877 340 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 PHKA2P46019 1235 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 DRP2Q13474 957 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 CUL4BQ13620 913 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 POSTNQ15063 836 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 SASS6Q6UVJ0 657 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 STXBP4Q6ZWJ1 553 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 SFR1Q86XK3 245 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 KIFAP3Q92845 792 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 PAGE5Q96GU1 130 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 REEP2Q9BRK0 252 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 TRIM6Q9C030 488 aaPredicted RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 CUEDC2Q9H467 287 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 PARVGQ9HBI0 331 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 BLOC1S4Q9NUP1 217 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 USP25Q9UHP3 1055 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 RBAK-RBAKDNI3L0D1 243 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 MAFO75444 373 aaPredicted RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 ACRP10323 421 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 ZSCAN20P17040 1043 aaPredicted RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 MUTP22033 750 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 CCSAPQ6IQ19 270 aaPredicted RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 B3GNT9Q6UX72 402 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 FAM212AQ96EL1 285 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 NIFKQ9BYG3 293 aaKnown RBP6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 SLC39A2Q9NP94 309 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 TRPV2Q9Y5S1 764 aa6.41□□□□□ -1.38
HNRNPU-220ENST00000639667 GRIN2DO15399 1336 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 K7ERI5 159 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 HAS3O00219 553 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 GTPBP6O43824 516 aaPredicted RBP6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 UPP2O95045 317 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 LYPLA2O95372 231 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 C22orf31O95567 290 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 MRPS6P82932 125 aaKnown RBP6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 PTPN11Q06124 597 aaPredicted RBP6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 LAMTOR4Q0VGL1 99 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 PTK7Q13308 1070 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 ZNF618Q5T7W0 954 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 SH3RF1Q7Z6J0 888 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 CDR2LQ86X02 465 aaPredicted RBP6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 ASAP3Q8TDY4 903 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 COL1A2P08123 1366 aa6.4□□□□□ -1.38
HNRNPU-220ENST00000639667 SMIM35A0A1B0GVV1 85 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 DENND3A2RUS2 1198 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 TRAK2O60296 914 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 PRR29P0C7W0 189 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 SELPP16109 830 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 NMT1P30419 496 aaKnown RBP6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 PAK2Q13177 524 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 STIM1Q13586 685 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 MXD4Q14582 209 aaPredicted RBP6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 FAM26FQ5R3K3 315 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 TWF2Q6IBS0 349 aaKnown RBP6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 LRRC8DQ7L1W4 858 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 ZBTB33Q86T24 672 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 KIAA0319LQ8IZA0 1049 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 TMEM199Q8N511 208 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 HPS3Q969F9 1004 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 PIN4Q9Y237 131 aaKnown RBP6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 USP20Q9Y2K6 914 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 PCDHA2Q9Y5H9 948 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 PCNTO95613 3336 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 ASAP2O43150 1006 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 RPN1P04843 607 aaKnown RBP6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 ZBED2Q9BTP6 218 aa6.4□□□□□ -1.39
HNRNPU-220ENST00000639667 CELF4Q9BZC1 486 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms