RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	MTMR1	Q13613	665 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	DSC3	Q14574	896 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	ACAP1	Q15027	740 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	PTPN14	Q15678	1187 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	CLLU1OS	Q5K130	101 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	DCLRE1A	Q6PJP8	1040 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	PJA1	Q8NG27	643 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	HELQ	Q8TDG4	1101 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	CUL5	Q93034	780 aa		13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	SMG5	Q9UPR3	1016 aa	Known RBP	13.43	□□□□□ -0.26
PAX6-238	ENST00000638755	LAMTOR5	O43504	91 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	CYTH3	O43739	400 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	STAT5B	P51692	787 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	GIT2	Q14161	759 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	ZNF528	Q3MIS6	628 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	PPFIBP1	Q86W92	1011 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	TMEM173	Q86WV6	379 aa	Predicted RBP	13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	RIOX1	Q9H6W3	641 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	JPH1	Q9HDC5	661 aa	Predicted RBP	13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	SLC9A2	Q9UBY0	812 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	IRAK3	Q9Y616	596 aa		13.42	□□□□□ -0.26
PAX6-238	ENST00000638755	CCER2	I3L3R5	266 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	CTSA	P10619	480 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	ZSCAN20	P17040	1043 aa	Predicted RBP	13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	KLRC2	P26717	231 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	NT5C2	P49902	561 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	CRYBB1	P53674	252 aa	Predicted RBP	13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	PLPPR4	Q7Z2D5	763 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	ECHDC2	Q86YB7	292 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	PARD6A	Q9NPB6	346 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	FBXO4	Q9UKT5	387 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	PCDHGA2	Q9Y5H1	932 aa		13.41	□□□□□ -0.26
PAX6-238	ENST00000638755	EVPL	Q92817	2033 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	MEIS2	O14770	477 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	VTN	P04004	478 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	SSB	P05455	408 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	MYB	P10242	640 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	TGM1	P22735	817 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	CLCN4	P51793	760 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	POLG	P54098	1239 aa	Predicted RBP	13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	ACTR2	P61160	394 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	C20orf194	Q5TEA3	1177 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	C15orf39	Q6ZRI6	1047 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	DDX53	Q86TM3	631 aa	Known RBP	13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	STAM	Q92783	540 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	BORCS6	Q96GS4	357 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	MYADM	Q96S97	322 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	BCO2	Q9BYV7	579 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	EPC1	Q9H2F5	836 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	EPS15L1	Q9UBC2	864 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	GMEB2	Q9UKD1	530 aa		13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.4	□□□□□ -0.26
PAX6-238	ENST00000638755	GRM4	Q14833	912 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	WTAP	Q15007	396 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	IGSF21	Q96ID5	467 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	KLHL5	Q96PQ7	755 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	EMILIN2	Q9BXX0	1053 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	MRPL9	Q9BYD2	267 aa	Known RBP	13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	KRT23	Q9C075	422 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	WDR6	Q9NNW5	1121 aa	Known RBP	13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	ZSCAN32	Q9NX65	697 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	ANGPTL2	Q9UKU9	493 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	UBIAD1	Q9Y5Z9	338 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	ZFYVE26	Q68DK2	2539 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	CLUH	O75153	1309 aa		13.39	□□□□□ -0.27
PAX6-238	ENST00000638755	CCDC195	A0A1B0GUA6	201 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	PIK3CD	O00329	1044 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	HBP1	O60381	514 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	GPR32	O75388	356 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	CNP	P09543	421 aa	Known RBP	13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	MFAP1	P55081	439 aa	Known RBP	13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	STARD6	P59095	220 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	SPEM2	Q0P670	501 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	SNW1	Q13573	536 aa	Known RBP	13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	UBXN2B	Q14CS0	331 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	SEC23A	Q15436	765 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	METTL13	Q8N6R0	699 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	ZBTB44	Q8NCP5	570 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	NETO1	Q8TDF5	533 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	NXPE3	Q969Y0	559 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	SHD	Q96IW2	340 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	SDF4	Q9BRK5	362 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	JADE2	Q9NQC1	790 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	MAN1C1	Q9NR34	630 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	MTF2	Q9Y483	593 aa	Predicted RBP	13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	MIA3	Q5JRA6	1907 aa		13.38	□□□□□ -0.27
PAX6-238	ENST00000638755	CNOT1	A5YKK6	2376 aa	Known RBP	13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	KANSL1L	A0AUZ9	987 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	SLC30A4	O14863	429 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	BACH1	O14867	736 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	LPAL2	Q16609	132 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	LONRF3	Q496Y0	759 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	TSSK4	Q6SA08	328 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	BBX	Q8WY36	941 aa	Predicted RBP	13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms