RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 WTIPA6NIX2 430 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 SMIM23A6NLE4 172 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 hCG_1984214I3L0E3 225 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 GFPT2O94808 682 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 ZBTB7AO95365 584 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 SF3A3Q12874 501 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 PRPF4BQ13523 1007 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC29A2Q14542 456 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 SCFD1Q8WVM8 642 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 TMEM260Q9NX78 707 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 MTRF1LQ9UGC7 380 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 PARP2Q9UGN5 583 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 CORO1CQ9ULV4 474 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 TDP2O95551 362 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 NR2F2P24468 414 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 PON1P27169 355 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 PRDX5P30044 214 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 GALNTL6Q49A17 601 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 CDCA2Q69YH5 1023 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 DPY19L2P1Q6NXN4 242 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 DNAAF5Q86Y56 855 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 MICAL1Q8TDZ2 1067 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 NIP7Q9Y221 180 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 PCDHA2Q9Y5H9 948 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 KDM3AQ9Y4C1 1321 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 KIAA1551Q9HCM1 1747 aa16.85■□□□□ 0.29
CACNA1A-235ENST00000637004 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 IGF2BP3O00425 579 aaKnown RBP eCLIP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 SMNDC1O75940 238 aaKnown RBP eCLIP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 IFNAR2P48551 515 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 COPS2P61201 443 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 U2AF1L4Q8WU68 220 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 ANKRD27Q96NW4 1050 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 STK32BQ9NY57 414 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 SLC5A4Q9NY91 659 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 OAS1P00973 400 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 CNGA2Q16280 664 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 JAMLQ86YT9 394 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 FBXO25Q8TCJ0 367 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 DYDC1Q8WWB3 177 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 NR2E1Q9Y466 385 aa16.84■□□□□ 0.29
CACNA1A-235ENST00000637004 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 XRCC5P13010 732 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 FERP16591 822 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 ATP11AP98196 1134 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 BNIP1Q12981 228 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 MAPK7Q13164 816 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 DZIP1Q86YF9 867 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 RFFLQ8WZ73 363 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 SH3GL3Q99963 347 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 SNX24Q9Y343 169 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.29
CACNA1A-235ENST00000637004 O00370 1275 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 RASGRF2O14827 1237 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 MARCH6O60337 910 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ADCY7P51828 1080 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 GALCP54803 685 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 KCTD19Q17RG1 926 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 MIS18BP1Q6P0N0 1132 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ZDHHC24Q6UX98 284 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 CCDC24Q8N4L8 307 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 PIGSQ96S52 555 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 MTFR1LQ9H019 292 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 MYH14Q7Z406 1995 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 DDX3YO15523 660 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ECM1Q16610 540 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 SPTY2D1Q68D10 685 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 GLG1Q92896 1179 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 CCDC113Q9H0I3 377 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 KIF9Q9HAQ2 790 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ARHGEF3Q9NR81 526 aa16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-235ENST00000637004 PODXLO00592 558 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 HSPA6P17066 643 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 HIBADHP31937 336 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 CCNG1P51959 295 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 TNFAIP8L3Q5GJ75 292 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 HYIQ5T013 277 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 NCANO14594 1321 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
CACNA1A-235ENST00000637004 LMNB1P20700 586 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms