RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 FERMT1Q9BQL6 677 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SUCLA2Q9P2R7 463 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 APEX2Q9UBZ4 518 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 WTIPA6NIX2 430 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 PSMD10O75832 226 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GZMAP12544 262 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GARTP22102 1010 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 FMO5P49326 533 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF720Q7Z2F6 126 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ANKRD35Q8N283 1001 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 TRERF1Q96PN7 1200 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CHP1Q99653 195 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 MTFR1LQ9H019 292 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 VPS18Q9P253 973 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GOLGA6L7A0A1B0GV03 622 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SPOPO43791 374 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 OSBPP22059 807 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 MIIPQ5JXC2 388 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 ZFYVE27Q5T4F4 411 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 EFCAB13Q8IY85 973 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 NSRP1Q9H0G5 558 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 INTS2Q9H0H0 1204 aaKnown RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 GJA3Q9Y6H8 435 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 MYH3P11055 1940 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 NR3C2P08235 984 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 VAMP7P51809 220 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CDC42EP1Q00587 391 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 CYP27A1Q02318 531 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 KCTD2Q14681 263 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 BRDTQ58F21 947 aaPredicted RBP4.94□□□□□ -1.62
SCN1A-210ENST00000635776 SPDYCQ5MJ68 293 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 TCHPQ9BT92 498 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 TTYH3Q9C0H2 523 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 AGPAT5Q9NUQ2 364 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 BCS1LQ9Y276 419 aa4.94□□□□□ -1.62
SCN1A-210ENST00000635776 LTBP3Q9NS15 1303 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 KCNK3O14649 394 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 HNRNPDLO14979 420 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLC1A1P43005 524 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLC12A3P55017 1021 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 GPC5P78333 572 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLMAPQ14BN4 828 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SND1Q7KZF4 910 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ZC3H3Q8IXZ2 948 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 MOV10L1Q9BXT6 1211 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 PNMA3Q9UL41 463 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 KRIT1O00522 736 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 EBAG9O00559 213 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 HSD17B4P51659 736 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 CAV1Q03135 178 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 DHX34Q14147 1143 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SPATA4Q8NEY3 305 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.93□□□□□ -1.623e-8■□□□□ 9.3
SCN1A-210ENST00000635776 KCNH7Q9NS40 1196 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 UBIAD1Q9Y5Z9 338 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 YWHABP31946 246 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 POLGP54098 1239 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 GHRHRQ02643 423 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 RAD51AP2Q09MP3 1159 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 PRPF4BQ13523 1007 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 DPY19L2Q6NUT2 758 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 CARD9Q9H257 536 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLC38A10Q9HBR0 1119 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ABCB6Q9NP58 842 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF277Q9NRM2 450 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 BCORQ6W2J9 1755 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 NFASCO94856 1347 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 IGSF9BQ9UPX0 1349 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 TNFRSF8P28908 595 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 NSFP46459 744 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 BIRC3Q13489 604 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 FOXP3Q9BZS1 431 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 IFT122Q9HBG6 1241 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 HIP1RO75146 1068 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 DPEP1P16444 411 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ARHGAP25P42331 645 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLC26A2P50443 739 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF131P52739 623 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 CXCL9Q07325 125 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SLC35C1Q96A29 364 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 C12orf42Q96LP6 360 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 PURBQ96QR8 312 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 RPS6KC1Q96S38 1066 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 PDCD2LQ9BRP1 358 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 AGPAT3Q9NRZ7 376 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 PCDHGC5Q9Y5F6 944 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ASAP2O43150 1006 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 HEXIM1O94992 359 aaKnown RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 TGFB3P10600 412 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 BACE1P56817 501 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 TAP1Q03518 808 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 CCNI2Q6ZMN8 369 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 SYDE1Q6ZW31 735 aaPredicted RBP4.93□□□□□ -1.62
SCN1A-210ENST00000635776 GPD1LQ8N335 351 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 FBXL13Q8NEE6 735 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 NKX2-3Q8TAU0 364 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 ACTRT1Q8TDG2 376 aa4.93□□□□□ -1.62
SCN1A-210ENST00000635776 KCTD10Q9H3F6 313 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms