RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 PPM1EQ8WY54 764 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 RUNDC1Q96C34 613 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 LCORQ96JN0 433 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 NOX5Q96PH1 765 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 WRNIP1Q96S55 665 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TTC1Q99614 292 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 BOCQ9BWV1 1114 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 IFT122Q9HBG6 1241 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 EMC7Q9NPA0 242 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 OXSMQ9NWU1 459 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 THRAP3Q9Y2W1 955 aaKnown RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 SIT1Q9Y3P8 196 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TSC22D4Q9Y3Q8 395 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 B3GALT1Q9Y5Z6 326 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 EID1Q9Y6B2 187 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 SETD1BQ9UPS6 1966 aaKnown RBP3.63□□□□□ -1.83
PSPC1-208ENST00000635562 ZNF536O15090 1300 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 WASHC2CQ9Y4E1 1318 aa3.63□□□□□ -1.83
PSPC1-208ENST00000635562 TCRBV5S2A0A599 114 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 KRIT1O00522 736 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SLC27A2O14975 620 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 LAMTOR5O43504 91 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 GAS7O60861 476 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 C8BP07358 591 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 FAM200BP0CF97 657 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 C6P13671 934 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SCP2P22307 547 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SDHAP31040 664 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 EXOSC10Q01780 885 aaKnown RBP3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SMAD4Q13485 552 aaKnown RBP3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SEC23AQ15436 765 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 CHRNA2Q15822 529 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 KCTD1Q719H9 257 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SPATS2Q86XZ4 545 aaKnown RBP3.62□□□□□ -1.83
PSPC1-208ENST00000635562 DRC7Q8IY82 874 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 NLGN4XQ8N0W4 816 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 EFHBQ8N7U6 833 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 CLEC4DQ8WXI8 215 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 USP7Q93009 1102 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 NEUROD6Q96NK8 337 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 CEP89Q96ST8 783 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 CDC5LQ99459 802 aaKnown RBP3.62□□□□□ -1.83
PSPC1-208ENST00000635562 GORASP1Q9BQQ3 440 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 TRIM8Q9BZR9 551 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 CD244Q9BZW8 370 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SEMA4AQ9H3S1 761 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 HOMER2Q9NSB8 354 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SPTLC3Q9NUV7 552 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 THG1LQ9NWX6 298 aaKnown RBP3.62□□□□□ -1.83
PSPC1-208ENST00000635562 HSPBP1Q9NZL4 362 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 H2AFY2Q9P0M6 372 aaPredicted RBP3.62□□□□□ -1.83
PSPC1-208ENST00000635562 MYOTQ9UBF9 498 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 DSEQ9UL01 958 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 INVSQ9Y283 1065 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 ZKSCAN5Q9Y2L8 839 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 SPO11Q9Y5K1 396 aa3.62□□□□□ -1.83
PSPC1-208ENST00000635562 FAM90A27PA6NNH2 459 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ACOT7O00154 380 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 KCNK3O14649 394 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 PLIN1O60240 522 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 MAFKO60675 156 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 FZD7O75084 574 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 CAND2O75155 1236 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 FSHBP01225 129 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 LTFP02788 710 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 C4BPAP04003 597 aaKnown RBP3.61□□□□□ -1.83
PSPC1-208ENST00000635562 LDHCP07864 332 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 HMGA2P52926 109 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 PHC1P78364 1004 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 IRF9Q00978 393 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 KCTD2Q14681 263 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 GPR158Q5T848 1215 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 CC2D1AQ6P1N0 951 aaPredicted RBP3.61□□□□□ -1.83
PSPC1-208ENST00000635562 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.61□□□□□ -1.83
PSPC1-208ENST00000635562 FAM126BQ8IXS8 530 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 OTUD6BQ8N6M0 293 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ATL2Q8NHH9 583 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 GPR101Q96P66 508 aaPredicted RBP3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ARPC5LQ9BPX5 153 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ASPSCR1Q9BZE9 553 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 PUS7LQ9H0K6 701 aaKnown RBP3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ZNF700Q9H0M5 742 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ZHX3Q9H4I2 956 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 BCAS3Q9H6U6 928 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 RXFP1Q9HBX9 757 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 ARNT2Q9HBZ2 717 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 PCDHB4Q9Y5E5 795 aa3.61□□□□□ -1.83
PSPC1-208ENST00000635562 RASSF10A6NK89 507 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 H7C1D1 291 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ULK1O75385 1050 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 PRKD3O94806 890 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 FOSP01100 380 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 PTPN1P18031 435 aaKnown RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 KRT15P19012 456 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 GJA4P35212 333 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 GUCY2FP51841 1108 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 KPNA1P52294 538 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-208ENST00000635562 ITGA1P56199 1179 aa3.6□□□□□ -1.83
PSPC1-208ENST00000635562 IL2P60568 153 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms