RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PRLRP16471 622 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SLC9A1P19634 815 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 EDNRBP24530 442 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 ABCD1P33897 745 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 NF2P35240 595 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 COPB2P35606 906 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 PRKCIP41743 596 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 KIF11P52732 1056 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 NCKAP1LP55160 1127 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 POLR2FP61218 127 aaKnown RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 AMPD2Q01433 879 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 PPIL2Q13356 520 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 HSP90AA2PQ14568 343 aaPredicted RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 NAA30Q147X3 362 aaPredicted RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 PWP2Q15269 919 aaKnown RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 UGCGQ16739 394 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 WHAMMP3Q1A5X7 153 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 XKR9Q5GH70 373 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 TREML2Q5T2D2 321 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 MIS18BP1Q6P0N0 1132 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 ANO5Q75V66 913 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 HAUS6Q7Z4H7 955 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SRGAP1Q7Z6B7 1085 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 KIAA1328Q86T90 577 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SYCP3Q8IZU3 236 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 RNF10Q8N5U6 811 aaKnown RBP6.09□□□□□ -1.43
NEK3-211ENST00000629912 CEP112Q8N8E3 955 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 MNS1Q8NEH6 495 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 UBXN4Q92575 508 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 RABGGTAQ92696 567 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 KIFAP3Q92845 792 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 ATP6V0A1Q93050 837 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 VTI1AQ96AJ9 217 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 LACRTQ9GZZ8 138 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SIX2Q9NPC8 291 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 PKD2L1Q9P0L9 805 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 BTBD7Q9P203 1132 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 SLC9A2Q9UBY0 812 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 GUCA1BQ9UMX6 200 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 EXOC7Q9UPT5 735 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 FRMD4BQ9Y2L6 1034 aa6.09□□□□□ -1.43
NEK3-211ENST00000629912 ATP8B3O60423 1300 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 OTOFQ9HC10 1997 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 SOWAHBA6NEL2 793 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 BTNL10A8MVZ5 291 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ADM5C9JUS6 153 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 H0YCG3 227 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ZNF862O60290 1169 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 CNMDO75829 334 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 DGAT1O75907 488 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 TUBBP07437 444 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 PLEKP08567 350 aaPredicted RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 SUPT20HL2P0C7V6 817 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 UCHL3P15374 230 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 H2AFXP16104 143 aaPredicted RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 YBX3P16989 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
NEK3-211ENST00000629912 OSBPP22059 807 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 FMO5P49326 533 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ALDH5A1P51649 535 aaPredicted RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 SMTNP53814 917 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 NPEPPSP55786 919 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 JAM2P57087 298 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ACTR2P61160 394 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 CYP27A1Q02318 531 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 MOGSQ13724 837 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 PRKG1Q13976 671 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 PLS1Q14651 629 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ASIC2Q16515 512 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 SLC18A3Q16572 532 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ERCC6LQ2NKX8 1250 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 XKR3Q5GH77 459 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 LDLRAD1Q5T700 205 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 SWSAP1Q6NVH7 229 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 INTS8Q75QN2 995 aaKnown RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 FASTKD5Q7L8L6 764 aaKnown RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 TRAPPC11Q7Z392 1133 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ARMC9Q7Z3E5 817 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 FMNL3Q8IVF7 1028 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 KSR1Q8IVT5 923 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 ANKRD35Q8N283 1001 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 GPR161Q8N6U8 529 aaKnown RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 FAM133AQ8N9E0 248 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 TMEM161BQ8NDZ6 487 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 MCPH1Q8NEM0 835 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 CDCA5Q96FF9 252 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 CRACR2AQ9BSW2 395 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 NIFKQ9BYG3 293 aaKnown RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 STK33Q9BYT3 514 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 SPATC1LQ9H0A9 340 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 DEF6Q9H4E7 631 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 JPH1Q9HDC5 661 aaPredicted RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 NLRC4Q9NPP4 1024 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 LUC7LQ9NQ29 371 aaKnown RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 GABBR1Q9UBS5 961 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 AGTPBP1Q9UPW5 1226 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 PPME1Q9Y570 386 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 MAFBQ9Y5Q3 323 aaPredicted RBP6.08□□□□□ -1.44
NEK3-211ENST00000629912 DOCK5Q9H7D0 1870 aa6.08□□□□□ -1.44
NEK3-211ENST00000629912 SCN4AP35499 1836 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms