RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM26FQ5R3K3 315 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 KCTD1Q719H9 257 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 SYT15Q9BQS2 421 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 PCDHA12Q9UN75 941 aa13.49□□□□□ -0.25
LITAF-221ENST00000622633 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 E7EVH7 732 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 E9PMD0 336 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 PJA2O43164 708 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 NOL4O94818 638 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 TTLL1O95922 423 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 TCP1P17987 556 aaKnown RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 BPIFB4P59827 614 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 TMED1Q13445 227 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 BYSLQ13895 437 aaKnown RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 ALS2CLQ60I27 953 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 KCTD16Q68DU8 428 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ANO7Q6IWH7 933 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ZNF280DQ6N043 979 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ZNF572Q7Z3I7 529 aaPredicted RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 LCA5Q86VQ0 697 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 OGFOD1Q8N543 542 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 HVCN1Q96D96 273 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 MS4A14Q96JA4 679 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 LSM14BQ9BX40 385 aaKnown RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 TLR10Q9BXR5 811 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 FAM184BQ9ULE4 1060 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 TLR2O60603 784 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 GFPT2O94808 682 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ALADP13716 330 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 PSMC4P43686 418 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 CLK2P49760 499 aaKnown RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 CRY2Q49AN0 593 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ANKRD20A2Q5SQ80 823 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ANKRD20A1Q5TYW2 823 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 KLHDC7AQ5VTJ3 777 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 ANKRD20A3Q5VUR7 823 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 PROM2Q8N271 834 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 CCT6BQ92526 530 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 RUFY1Q96T51 708 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
LITAF-221ENST00000622633 BMP2KQ9NSY1 1161 aaPredicted RBP13.48□□□□□ -0.25
LITAF-221ENST00000622633 CDK5RAP2Q96SN8 1893 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 SERPINB2P05120 415 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 VIMP08670 466 aaKnown RBP13.47□□□□□ -0.25
LITAF-221ENST00000622633 GHRP10912 638 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 DNA2P51530 1060 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 ARID5AQ03989 594 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 NNTQ13423 1086 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 NDNQ99608 321 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 MXD3Q9BW11 206 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 EDEM3Q9BZQ6 932 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 GMEB1Q9Y692 573 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 SSU72P8A0A1W2PR75 194 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 ABLIM1O14639 778 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 RAD21O60216 631 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 BBOX1O75936 387 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 CLTAP09496 248 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 MDH1P40925 334 aaKnown RBP13.47□□□□□ -0.25
LITAF-221ENST00000622633 PAFAH1B1P43034 410 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 ITIH3Q06033 890 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
LITAF-221ENST00000622633 SLC9C1Q4G0N8 1177 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 HERC4Q5GLZ8 1057 aaPredicted RBP13.47□□□□□ -0.25
LITAF-221ENST00000622633 HAUS3Q68CZ6 603 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 USP17L6PQ6QN14 398 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 OLFML1Q6UWY5 402 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 MAATS1Q7Z4T9 603 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 NAF1Q96HR8 494 aaKnown RBP13.47□□□□□ -0.25
LITAF-221ENST00000622633 RBM12Q9NTZ6 932 aaKnown RBP13.47□□□□□ -0.25
LITAF-221ENST00000622633 CEP72Q9P209 647 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
LITAF-221ENST00000622633 MYH10P35580 1976 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 PLIN4Q96Q06 1357 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 POTECB2RU33 542 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 PLA2G4BP0C869 781 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 ADCY1Q08828 1119 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 CBX3Q13185 183 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 QPCTQ16769 361 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
LITAF-221ENST00000622633 PPP1R18Q6NYC8 613 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms