RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 C4orf47A7E2U8 309 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 GOLIM4O00461 696 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CAPN9O14815 690 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 GIPC1O14908 333 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 IPO8O15397 1037 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 MAFGO15525 162 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 GAS2O43903 313 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ECI2O75521 394 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 RPS6KA5O75582 802 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 EPN2O95208 641 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 TOP3BO95985 862 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ALDH2P05091 517 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CNPP09543 421 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 FGRP09769 529 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SNHG28P0DPA3 235 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CHRNB1P11230 501 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 TOP1P11387 765 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SPINK2P20155 84 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CD72P21854 359 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 UBA1P22314 1058 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 TARSP26639 723 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SLC16A2P36021 539 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF76P36508 570 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 HSD17B4P51659 736 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 BCAR1P56945 870 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 KRT76Q01546 638 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 NFX1Q12986 1120 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 TRAF1Q13077 416 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PPFIA1Q13136 1202 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SEMA3FQ13275 785 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 DSC3Q14574 896 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SF3A2Q15428 464 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 GRIK4Q16099 956 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF423Q2M1K9 1284 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 GNPTABQ3T906 1256 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 HSP90AB4PQ58FF6 505 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 GPATCH4Q5T3I0 446 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 LILRA6Q6PI73 481 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PARM1Q6UWI2 310 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CEP68Q76N32 757 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 RTL10Q7L3V2 364 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 WDR5BQ86VZ2 330 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF280BQ86YH2 543 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SCUBE3Q8IX30 993 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ABI1Q8IZP0 508 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 LRRC43Q8N309 656 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SYNPOQ8N3V7 929 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF843Q8N446 348 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 HNRNPLLQ8WVV9 542 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SEPT1Q8WYJ6 367 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 DNASE1L2Q92874 299 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 FGF14Q92915 247 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PHKBQ93100 1093 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF707Q96C28 371 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 WBP1Q96G27 269 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 IGSF21Q96ID5 467 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PDCD2LQ9BRP1 358 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 TRAIPQ9BWF2 469 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 MRPL9Q9BYD2 267 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PUS7LQ9H0K6 701 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SMARCAD1Q9H4L7 1026 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CCDC86Q9H6F5 360 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 RXFP1Q9HBX9 757 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 MRPL17Q9NRX2 175 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 COL20A1Q9P218 1284 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 TUBE1Q9UJT0 475 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CDH7Q9ULB5 785 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 KCNH3Q9ULD8 1083 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ISY1Q9ULR0 285 aaKnown RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 STX8Q9UNK0 236 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ST3GAL5Q9UNP4 418 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PCDHA1Q9Y5I3 950 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SIPA1L1O43166 1804 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 COL4A4P53420 1690 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 PLIN4Q96Q06 1357 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 LOC400499M0QZD8 3231 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 TTC3P53804 2025 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 SPDYE4A6NLX3 237 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 CHURC1-FNTBB4DL54 471 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 K7ESF4 209 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 CDX4O14627 284 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-211ENST00000621526 INPPL1O15357 1258 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 FIBPO43427 364 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 HYAL3O43820 417 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-211ENST00000621526 MGEA5O60502 916 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF623O75123 536 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 PRDM1O75626 825 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 C1QL1O75973 258 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 RHOBTB1O94844 696 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 MICAL2O94851 1124 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 ADH1AP07327 375 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 GALTP07902 379 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 POU2F2P09086 479 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 HNRNPA1P09651 372 aaKnown RBP eCLIP2.75□□□□□ -1.97
CPNE3-211ENST00000621526 FGFR1P11362 822 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 MYCLP12524 364 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-211ENST00000621526 SKIP12755 728 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 INSRRP14616 1297 aa2.75□□□□□ -1.97
CPNE3-211ENST00000621526 ZSCAN20P17040 1043 aaPredicted RBP2.75□□□□□ -1.97
CPNE3-211ENST00000621526 ATP5JP18859 108 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms