RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SHMT1P34896 483 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PRKCEQ02156 737 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 RNF180Q86T96 592 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ATRIPQ8WXE1 791 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 KCNH7Q9NS40 1196 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 RBAKQ9NYW8 714 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 SCINQ9Y6U3 715 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 H7C0C1 242 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 EIF4A3P38919 411 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ATP5OP48047 213 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 BSPRYQ5W0U4 402 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 KRT39Q6A163 491 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ERICH1Q86X53 443 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 RFX6Q8HWS3 928 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 NCAPGQ9BPX3 1015 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 POLD4Q9HCU8 107 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 CEP72Q9P209 647 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 TRIM49BA6NDI0 452 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PDXKO00764 312 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PRR29P0C7W0 189 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 CIITAP33076 1130 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ZBTB16Q05516 673 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 EHHADHQ08426 723 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 MOXD1Q6UVY6 613 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 RUFY4Q6ZNE9 571 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 SRGAP1Q7Z6B7 1085 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PANX2Q96RD6 677 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 GLIS2Q9BZE0 524 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 TRIM9Q9C026 710 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ANKEF1Q9NU02 776 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PIN4Q9Y237 131 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PIK3C2AO00443 1686 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ANKRD26Q9UPS8 1709 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ADCY8P40145 1251 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 EMC2Q15006 297 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 CRY2Q49AN0 593 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 GNASQ5JWF2 1037 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ZNF746Q6NUN9 644 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 NBPF11Q86T75 865 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 TMEM35BQ8NCS4 154 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PGBD4Q96DM1 585 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 PRDM5Q9NQX1 630 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 ZNF148Q9UQR1 794 aa10.18□□□□□ -0.78
CLTCL1-208ENST00000615606 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 SLC12A2P55011 1212 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 PRPSAP1Q14558 356 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 SEC23AQ15436 765 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 DUOXA2Q1HG44 320 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 CFAP157Q5JU67 520 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 TRIM7Q9C029 511 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 GPRC5DQ9NZD1 345 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 SEPT10Q9P0V9 454 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 CPSF3Q9UKF6 684 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ADAMTSL3P82987 1691 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 GAKO14976 1311 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 SCP2P22307 547 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 RPA1P27694 616 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 BIRC2Q13490 618 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ARL13BQ3SXY8 428 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 KAZNQ674X7 775 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ENOSF1Q7L5Y1 443 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 P3H4Q92791 437 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 C7orf25Q9BPX7 421 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 NHEJ1Q9H9Q4 299 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ADM5C9JUS6 153 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 PFDN6O15212 129 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 PRPSAP2O60256 369 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 CSPG5O95196 566 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 PLS3P13797 630 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 GBP1P32455 592 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 PPATQ06203 517 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 PTPROQ16827 1216 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ELMOD1Q8N336 334 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ANKS4BQ8N8V4 417 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 SAAL1Q96ER3 474 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 CDCA5Q96FF9 252 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 GLT1D1Q96MS3 346 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 VPS37BQ9H9H4 285 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 ABCC6O95255 1503 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 TBC1D8O95759 1140 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 CCT6BQ92526 530 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 TSC1Q92574 1164 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 TMEM143Q96AN5 459 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 KIF12Q96FN5 646 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 XRN1Q8IZH2 1706 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-208ENST00000615606 GAS2O43903 313 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 CYP2C9P11712 490 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 ATP1A3P13637 1013 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 DSG3P32926 999 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 KCNJ6P48051 423 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 RAB3IL1Q8TBN0 382 aa10.16□□□□□ -0.78
CLTCL1-208ENST00000615606 SYNPO2Q9UMS6 1093 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms